RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 NT5DC2Q9H857 520 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 KCNK13Q9HB14 408 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 MMP25Q9NPA2 562 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 DOPEY2Q9Y3R5 2298 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 OR5H15A6NDH6 313 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 B4GALT2O60909 372 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 DNAJB6O75190 326 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 STK16O75716 305 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 FAM155BO75949 473 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 DDAH2O95865 285 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 F10P00742 488 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 RNH1P13489 461 aaKnown RBP23.71■■□□□ 1.39
VEGFA-230ENST00000640482 EDN3P14138 238 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 CRABP2P29373 138 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 HSPA7P48741 367 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 QSOX2Q6ZRP7 698 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 SNX31Q8N9S9 440 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 CCT6BQ92526 530 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 FAR2Q96K12 515 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 C16orf45Q96MC5 204 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-230ENST00000640482 EHD1Q9H4M9 534 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 ABI3Q9P2A4 366 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 COPG2Q9UBF2 871 aa23.71■■□□□ 1.39
VEGFA-230ENST00000640482 ESYT3A0FGR9 886 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 PRMT3O60678 531 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 URI1O94763 535 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-230ENST00000640482 HPDP32754 393 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-230ENST00000640482 GUCY2DQ02846 1103 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 ESPL1Q14674 2120 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 H3F3CQ6NXT2 135 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 CMC1Q7Z7K0 106 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 TBC1D1Q86TI0 1168 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-230ENST00000640482 AMER2Q8N7J2 671 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 STAG3L4Q8TBR4 150 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 GAL3ST3Q96A11 431 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 PTCHD1Q96NR3 888 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 LRRC1Q9BTT6 524 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 NMRAL1Q9HBL8 299 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 OLAHQ9NV23 265 aa23.7■■□□□ 1.38
VEGFA-230ENST00000640482 PTBP2Q9UKA9 531 aaKnown RBP23.7■■□□□ 1.38
VEGFA-230ENST00000640482 A0A088AWK7 358 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 ANKDD1BA6NHY2 528 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 E2F3O00716 465 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 CLEC3AO75596 197 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 ZNF10P21506 573 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-230ENST00000640482 PDK4Q16654 411 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 WHAMMP3Q1A5X7 153 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 FBXO48Q5FWF7 155 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 EXT2Q93063 718 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 PTCD3Q96EY7 689 aaKnown RBP23.69■■□□□ 1.38
VEGFA-230ENST00000640482 RHBGQ9H310 441 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 SLC5A6Q9Y289 635 aa23.69■■□□□ 1.38
VEGFA-230ENST00000640482 PTPN13Q12923 2485 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 CYSRT1A8MQ03 144 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 PRAMEF2O60811 474 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 SLC35E2BP0CK96 405 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 TFEBP19484 476 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 SLC26A5P58743 744 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 TAS2R50P59544 299 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 BTN3A2P78410 334 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 EFTUD2Q15029 972 aaKnown RBP eCLIP23.68■■□□□ 1.384e-10■■■■■ 38.6
VEGFA-230ENST00000640482 MEP1AQ16819 746 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 XKR6Q5GH73 641 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 ACER2Q5QJU3 275 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 CEP128Q6ZU80 1094 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 CA13Q8N1Q1 262 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 ARMC2Q8NEN0 867 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 ESAMQ96AP7 390 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 SLX1AQ9BQ83 275 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 EFCAB11Q9BUY7 163 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 AICDAQ9GZX7 198 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 ALG9Q9H6U8 611 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 PRDM9Q9NQV7 894 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 ZDHHC18Q9NUE0 388 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 NUDT4Q9NZJ9 180 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 ERRFI1Q9UJM3 462 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-230ENST00000640482 CPAMD8Q8IZJ3 1885 aa23.68■■□□□ 1.38
VEGFA-230ENST00000640482 LRIT2A6NDA9 550 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 C4orf51C9J302 202 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 ERI3O43414 337 aaKnown RBP23.67■■□□□ 1.38
VEGFA-230ENST00000640482 CCNT2O60583 730 aaKnown RBP23.67■■□□□ 1.38
VEGFA-230ENST00000640482 LTA4HP09960 611 aaKnown RBP23.67■■□□□ 1.38
VEGFA-230ENST00000640482 PHBP35232 272 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 LAPTM5Q13571 262 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 FCRLBQ6BAA4 426 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 LRRC70Q7Z2Q7 622 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 CCDC91Q7Z6B0 441 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 CYP4X1Q8N118 509 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 BEST3Q8N1M1 668 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 SLC5A8Q8N695 610 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 MS4A6EQ96DS6 147 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 WDR34Q96EX3 536 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 C5orf34Q96MH7 638 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 NPLQ9BXD5 320 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-230ENST00000640482 CD244Q9BZW8 370 aa23.67■■□□□ 1.38
VEGFA-230ENST00000640482 HNRNPH1P31943 449 aaKnown RBP23.66■■□□□ 1.38
VEGFA-230ENST00000640482 BTG2P78543 158 aa23.66■■□□□ 1.38
VEGFA-230ENST00000640482 DOC2AQ14183 400 aa23.66■■□□□ 1.38
VEGFA-230ENST00000640482 HIST2H2ACQ16777 129 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-230ENST00000640482 PAGE2BQ5JRK9 111 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms