RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MT-ND1P03886 318 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 FEN1P39748 380 aaKnown RBP3.59□□□□□ -1.83
CCDC7-216ENST00000640058 RGS7P49802 495 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 CALD1Q05682 793 aaKnown RBP3.59□□□□□ -1.83
CCDC7-216ENST00000640058 IL10RBQ08334 325 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 CAMK2DQ13557 499 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 RUNX3Q13761 415 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 TAZQ16635 292 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 LRRC37A5PQ49AS3 106 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 LRRC73Q5JTD7 316 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 FHL5Q5TD97 284 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 KRT80Q6KB66 452 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 Q6ZVQ6 151 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 ZC3H3Q8IXZ2 948 aaKnown RBP3.59□□□□□ -1.83
CCDC7-216ENST00000640058 CCDC185Q8N715 623 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 CCDC89Q8N998 374 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 KIAA1524Q8TCG1 905 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 SLC26A7Q8TE54 656 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 RFT1Q96AA3 541 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 NABP1Q96AH0 204 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 LURAP1Q96LR2 239 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 ALKBH7Q9BT30 221 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-216ENST00000640058 WDR41Q9HAD4 459 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 IARS2Q9NSE4 1012 aaKnown RBP3.59□□□□□ -1.83
CCDC7-216ENST00000640058 TMOD3Q9NYL9 352 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 NRBP1Q9UHY1 535 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 AGTPBP1Q9UPW5 1226 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 SATB2Q9UPW6 733 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 TTLL3Q9Y4R7 772 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 UMODL1Q5DID0 1318 aa3.59□□□□□ -1.83
CCDC7-216ENST00000640058 A0A1W2PQ72 361 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 PRSS46E5RG02 174 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 MLNRO43193 412 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 VENTXO95231 258 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 QDPRP09417 244 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 FAM200BP0CF97 657 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 GOT1P17174 413 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 ERCC2P18074 760 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 CTNNA2P26232 953 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 ATAD3CQ5T2N8 411 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 MFSD4BQ5TF39 518 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 EMBQ6PCB8 327 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 TMUB2Q71RG4 321 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 LSMEM1Q8N8F7 131 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 ITLN1Q8WWA0 313 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 ERP27Q96DN0 273 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 RMDN2Q96LZ7 410 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 PNNQ9H307 717 aaKnown RBP3.58□□□□□ -1.84
CCDC7-216ENST00000640058 DPEP2Q9H4A9 486 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 RPF1Q9H9Y2 349 aaKnown RBP3.58□□□□□ -1.84
CCDC7-216ENST00000640058 ANKEF1Q9NU02 776 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 RUVBL2Q9Y230 463 aaKnown RBP3.58□□□□□ -1.84
CCDC7-216ENST00000640058 NCKAP1Q9Y2A7 1128 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 NAALAD2Q9Y3Q0 740 aa3.58□□□□□ -1.84
CCDC7-216ENST00000640058 FIBPO43427 364 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 PENKP01210 267 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-216ENST00000640058 C9P02748 559 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 FYNP06241 537 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 HSP90AA1P07900 732 aaKnown RBP3.57□□□□□ -1.84
CCDC7-216ENST00000640058 FCGR2BP31994 310 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-216ENST00000640058 FCGR2CP31995 323 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 MFAP3P55082 362 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 POU5F1Q01860 360 aaKnown RBP3.57□□□□□ -1.84
CCDC7-216ENST00000640058 CYLC2Q14093 348 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-216ENST00000640058 COX8CQ7Z4L0 72 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 HIPK1Q86Z02 1210 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 C11orf42Q8N5U0 333 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 RMDN1Q96DB5 314 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 ZIM3Q96PE6 472 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 TNFRSF13CQ96RJ3 184 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 PCDHB18PQ96TA0 734 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 CENPOQ9BU64 300 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 ST6GALNAC4Q9H4F1 302 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 MARCH7Q9H992 704 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 CLEC5AQ9NY25 188 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 NKIRAS2Q9NYR9 191 aa3.57□□□□□ -1.84
CCDC7-216ENST00000640058 DBF4Q9UBU7 674 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-216ENST00000640058 SALL1Q9NSC2 1324 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 TRAV18A0A075B6X5 111 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 TMEM150CB9EJG8 249 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 TCP10L2B9ZVM9 353 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 LMO7DNF2Z398 122 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 UBE2CO00762 179 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 PGRMC2O15173 223 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 CENPBP07199 599 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-216ENST00000640058 FDPSP14324 419 aaKnown RBP3.56□□□□□ -1.84
CCDC7-216ENST00000640058 ELK3P41970 407 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 MATKP42679 507 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 SLC1A4P43007 532 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 PEX3P56589 373 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 EVCP57679 992 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 GRB14Q14449 540 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 KYNUQ16719 465 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 Q1RN00 199 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 ZRANB3Q5FWF4 1079 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 KRBOX4Q5JUW0 171 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 ZNF506Q5JVG8 444 aa3.56□□□□□ -1.84
CCDC7-216ENST00000640058 BTNL8Q6UX41 500 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms