RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SUPT3HO75486 399 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 F10P00742 488 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 LTA4HP09960 611 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PHBP35232 272 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 OR4D2P58180 307 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 ZNF33BQ06732 778 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 DLG1Q12959 904 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 BMPR2Q13873 1038 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 UAP1Q16222 522 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PDK4Q16654 411 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 XKR6Q5GH73 641 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 MROH9Q5TGP6 573 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 ABHD17BQ5VST6 288 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PLAG1Q6DJT9 500 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PAPD4Q6PIY7 484 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 CEP128Q6ZU80 1094 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 MMGT1Q8N4V1 131 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 NOA1Q8NC60 698 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PLPP5Q8NEB5 264 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 MNS1Q8NEH6 495 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PRR7Q8TB68 274 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 LPAR4Q99677 370 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 AICDAQ9GZX7 198 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 RHBGQ9H310 441 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 CLK4Q9HAZ1 481 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 NINJ2Q9NZG7 142 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 NUDT4Q9NZJ9 180 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 TEKT2Q9UIF3 430 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PTBP2Q9UKA9 531 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 CPAMD8Q8IZJ3 1885 aa15.77■□□□□ 0.11
CACNA1A-259ENST00000638114 A0A0G2JN53 185 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 ANKDD1BA6NHY2 528 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 A8MUI8 341 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 CBX6O95503 412 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 SMIM10L1P0DMW3 83 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 RNH1P13489 461 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 GSTM2P28161 218 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 KCNC1P48547 511 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 TNFSF10P50591 281 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 BTN3A2P78410 334 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 ELOAQ14241 798 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 EXT1Q16394 746 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 ISCA2Q86U28 154 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 GRHL3Q8TE85 626 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 KCTD4Q8WVF5 259 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 HAS2Q92819 552 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 GAL3ST3Q96A11 431 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 SMIM10Q96HG1 83 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 FAR2Q96K12 515 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 PTCHD1Q96NR3 888 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 CD244Q9BZW8 370 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 PITHD1Q9GZP4 211 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 EHD1Q9H4M9 534 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 NT5DC2Q9H857 520 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 KCNK13Q9HB14 408 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 IGSF5Q9NSI5 407 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 DMGDHQ9UI17 866 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 ACOT9Q9Y305 439 aa15.76■□□□□ 0.11
CACNA1A-259ENST00000638114 USP9YO00507 2555 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 TRAV17A0A0B4J275 112 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 BLACEA4D250 179 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 ANKUB1A6NFN9 424 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 UBXN8O00124 270 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 ERI3O43414 337 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 PRMT3O60678 531 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 PRAMEF4O60810 478 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 KERAO60938 352 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 WDPCPO95876 746 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 CTAGE8P0CG41 777 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 HNRNPH1P31943 449 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 IRF9Q00978 393 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 IRF8Q02556 426 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 DOC2AQ14183 400 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 UBAP2Q5T6F2 1119 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 PRAMEF9Q5VWM5 478 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 FCRLBQ6BAA4 426 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 FAM180AQ6UWF9 173 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 LRRC70Q7Z2Q7 622 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 CTAGE4Q8IX94 777 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 CYP4X1Q8N118 509 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 CA13Q8N1Q1 262 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 M1APQ8TC57 530 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 IFT81Q8WYA0 676 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 NXNL1Q96CM4 212 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 MS4A6EQ96DS6 147 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 PTCD3Q96EY7 689 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 SEC16BQ96JE7 1060 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 ATOH8Q96SQ7 321 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 BARD1Q99728 777 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 EFCAB11Q9BUY7 163 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 PRM3Q9NNZ6 103 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 SNX15Q9NRS6 342 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 STMN3Q9NZ72 180 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 COPG2Q9UBF2 871 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 ASB1Q9Y576 335 aa15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 SPTAN1Q13813 2472 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-259ENST00000638114 A0A087X1B8 175 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 A0A088AWK7 358 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 LRIT2A6NDA9 550 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms