RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 UPP1Q16831 310 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.65□□□□□ -1.99
VBP1-204ENST00000625964 TXNRD3NBQ6F5E7 133 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 TMED8Q6PL24 325 aaPredicted RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 TMEM182Q6ZP80 229 aaPredicted RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 TIPARPQ7Z3E1 657 aaKnown RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 TRMT11Q7Z4G4 463 aaKnown RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 COX8CQ7Z4L0 72 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 PHLDB2Q86SQ0 1253 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 CATSPER3Q86XQ3 398 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 TIGD4Q8IY51 512 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 DND1Q8IYX4 353 aaKnown RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 TEX26Q8N6G2 289 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 OCC1Q8TAD7 63 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 SETD6Q8TBK2 473 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 EXOC4Q96A65 974 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 ERP27Q96DN0 273 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 LURAP1Q96LR2 239 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 PSMB7Q99436 277 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 PAPOLGQ9BWT3 736 aaKnown RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 NACAP1Q9BZK3 213 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 FAM120CQ9NX05 1096 aaKnown RBP2.65□□□□□ -1.99
VBP1-204ENST00000625964 TP53TG3Q9ULZ0 132 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 SATB2Q9UPW6 733 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 KLK4Q9Y5K2 254 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 STYXL1Q9Y6J8 313 aa2.65□□□□□ -1.99
VBP1-204ENST00000625964 CCDC180Q9P1Z9 1646 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 HTR3EA5X5Y0 456 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 A8MU10 97 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 TCP10L2B9ZVM9 353 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 NPIPA3F8WFD2 350 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 PDHXO00330 501 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 OGTO15294 1046 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 ZNF749O43361 778 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 VIMP08670 466 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 FAM58BPP0C7Q3 252 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 FOLR2P14207 255 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 PIK3R1P27986 724 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 FEN1P39748 380 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 OR3A3P47888 321 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 NDUFV3P56181 108 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 GRB14Q14449 540 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 LRRC37A5PQ49AS3 106 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 SLC25A30Q5SVS4 291 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 SPOUT1Q5T280 376 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 C15orf52Q6ZUT6 534 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 Q71RC1 249 aaPredicted RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 DZIP1Q86YF9 867 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 HPS6Q86YV9 775 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 ZC3H3Q8IXZ2 948 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 BSCL2Q96G97 398 aaPredicted RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 GBP5Q96PP8 586 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 INTS14Q96SY0 518 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 PCDHB18PQ96TA0 734 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 ADNPQ9H2P0 1102 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 LMAN1LQ9HAT1 526 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 KCNK13Q9HB14 408 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 PDRG1Q9NUG6 133 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 DBF4Q9UBU7 674 aaPredicted RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 NOCTQ9UK39 431 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 PILRAQ9UKJ1 303 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 MRPS18CQ9Y3D5 142 aaKnown RBP2.64□□□□□ -1.99
VBP1-204ENST00000625964 MYH15Q9Y2K3 1946 aa2.64□□□□□ -1.99
VBP1-204ENST00000625964 H7C0S8 307 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 MLNRO43193 412 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TNFSF12O43508 249 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 GALR3O60755 368 aaPredicted RBP2.63□□□□□ -1.99
VBP1-204ENST00000625964 HPP00738 406 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 QDPRP09417 244 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 DLATP10515 647 aaKnown RBP2.63□□□□□ -1.99
VBP1-204ENST00000625964 ZFP36L2P47974 494 aaKnown RBP2.63□□□□□ -1.99
VBP1-204ENST00000625964 SRPXP78539 464 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 PPA1Q15181 289 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 MLF2Q15773 248 aaPredicted RBP2.63□□□□□ -1.99
VBP1-204ENST00000625964 TRAT1Q6PIZ9 186 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 Q6ZVQ6 151 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 KCNMB4Q86W47 210 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 PHC2Q8IXK0 858 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 THNSL1Q8IYQ7 743 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 LINC00612Q8N6U2 182 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 SSC4DQ8WTU2 575 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 RIT1Q92963 219 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TSSK2Q96PF2 358 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 OCR1Q9BZK8 76 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 UBQLN3Q9H347 655 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 C5orf66Q9H5L9 145 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 IL1RAPQ9NPH3 570 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 GPR83Q9NYM4 423 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 GMEB2Q9UKD1 530 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 A8MU76 341 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 ARHGEF33A8MVX0 844 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 RNF103O00237 685 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 INPP4BO15327 924 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 BCL2L11O43521 198 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TIMM44O43615 452 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 ANKRD34CP0C6C1 535 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TSPY3P0CV98 308 aa2.63□□□□□ -1.99
VBP1-204ENST00000625964 TSPY8P0CW00 308 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms