RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
LINC00963-217ENST00000624009 SLAMF7Q9NQ25 335 aa11.74□□□□□ -0.53
LINC00963-217ENST00000624009 LANCL2Q9NS86 450 aa11.74□□□□□ -0.53
LINC00963-217ENST00000624009 FETUBQ9UGM5 382 aa11.74□□□□□ -0.53
LINC00963-217ENST00000624009 ADGRE2Q9UHX3 823 aa11.74□□□□□ -0.53
LINC00963-217ENST00000624009 TMCO1Q9UM00 188 aa11.74□□□□□ -0.53
LINC00963-217ENST00000624009 A0A096LPK6 155 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 LRIT2A6NDA9 550 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 ANKDD1BA6NHY2 528 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 ACSL3O95573 720 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 RBP1P09455 135 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 ZNF888P0CJ79 500 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 MTHFD2P13995 350 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 PIK3CGP48736 1102 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 HSPA7P48741 367 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 ALDH18A1P54886 795 aaKnown RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 RHAGQ02094 409 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 TGM3Q08188 693 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 GTF3C1Q12789 2109 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 SLBPQ14493 270 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 NAA30Q147X3 362 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 RBBP5Q15291 538 aaKnown RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 PCBP2Q15366 365 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■■■■□ 20.3
LINC00963-217ENST00000624009 TLR1Q15399 786 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 EXT1Q16394 746 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 HIST2H2ACQ16777 129 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 MINDY4Q4G0A6 757 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 HIST2H2AA3Q6FI13 130 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 LCA5Q86VQ0 697 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 EFCAB3Q8N7B9 438 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 M1APQ8TC57 530 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 PSMF1Q92530 271 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 C8orf44Q96CB5 159 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 NXNL1Q96CM4 212 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 GPR78Q96P69 363 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 PAFAH2Q99487 392 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 UNKQ9C0B0 810 aaKnown RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 ROGDIQ9GZN7 287 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 HCN3Q9P1Z3 774 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 OPTCQ9UBM4 332 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 TEKT2Q9UIF3 430 aa11.73□□□□□ -0.53
LINC00963-217ENST00000624009 TNPO3Q9Y5L0 923 aaKnown RBP11.73□□□□□ -0.53
LINC00963-217ENST00000624009 CLEC18AA5D8T8 446 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 K7EPI3 171 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 FFAR3O14843 346 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 GPR42O15529 346 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 CHST10O43529 356 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 STATHP02808 62 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 SERPIND1P05546 499 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 EPB42P16452 691 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 EPORP19235 508 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 HNF4AP41235 474 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 MSH2P43246 934 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 TSFMP43897 325 aaKnown RBP11.72□□□□□ -0.53
LINC00963-217ENST00000624009 EFNA3P52797 238 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 IRF8Q02556 426 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 RAPSNQ13702 412 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 DOC2AQ14183 400 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 RCN2Q14257 317 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 SETDB1Q15047 1291 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 TERF2Q15554 542 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 INPP5JQ15735 1006 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-217ENST00000624009 NSDHLQ15738 373 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 INAQ16352 499 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 TSNAXIP1Q2TAA8 658 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 C18orf21Q32NC0 220 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-217ENST00000624009 TMEM35AQ53FP2 167 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 XKR6Q5GH73 641 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 C10orf62Q5T681 223 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-217ENST00000624009 LGSNQ5TDP6 509 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 H3F3CQ6NXT2 135 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 RPUSD3Q6P087 351 aaKnown RBP11.72□□□□□ -0.53
LINC00963-217ENST00000624009 CLEC18BQ6UXF7 455 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 ANKRD37Q7Z713 158 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 LAS2Q8IYD9 372 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 LGI4Q8N135 537 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 CLEC18CQ8NCF0 446 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 OR2L5Q8NG80 312 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 KCTD4Q8WVF5 259 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00963-217ENST00000624009 HAS2Q92819 552 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 MS4A6EQ96DS6 147 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 FAR2Q96K12 515 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 SLC29A3Q9BZD2 475 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 L2HGDHQ9H9P8 463 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 MMACHCQ9Y4U1 282 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
LINC00963-217ENST00000624009 MYO7BQ6PIF6 2116 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 IGKV3D-11A0A0A0MRZ8 115 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 BLACEA4D250 179 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 SUPT3HB4E1H0 165 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 UBXN8O00124 270 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PSMD12O00232 456 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 CCNT2O60583 730 aaKnown RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PRMT3O60678 531 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms