RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 PDK4Q16654 411 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 EIF2S3LQ2VIR3 472 aaKnown RBP18.52■□□□□ 0.56
PTBP1-219ENST00000621737 SFT2D3Q587I9 215 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 FBXO48Q5FWF7 155 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 PAPD4Q6PIY7 484 aaKnown RBP18.52■□□□□ 0.56
PTBP1-219ENST00000621737 TBC1D1Q86TI0 1168 aaPredicted RBP18.52■□□□□ 0.56
PTBP1-219ENST00000621737 AMER2Q8N7J2 671 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 SNX31Q8N9S9 440 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 OR1N1Q8NGS0 311 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 STAG3L4Q8TBR4 150 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 GRHL3Q8TE85 626 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 GAL3ST3Q96A11 431 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 LPAR4Q99677 370 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 AICDAQ9GZX7 198 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 ALG9Q9H6U8 611 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 PLA2G3Q9NZ20 509 aa18.52■□□□□ 0.56
PTBP1-219ENST00000621737 PTBP2Q9UKA9 531 aaKnown RBP18.52■□□□□ 0.56
PTBP1-219ENST00000621737 MAST4O15021 2626 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 ANKUB1A6NFN9 424 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 CLGNO14967 610 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 SEMA7AO75326 666 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 WDPCPO95876 746 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 RNH1P13489 461 aaKnown RBP18.51■□□□□ 0.55
PTBP1-219ENST00000621737 TFEBP19484 476 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 ZNF33BQ06732 778 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 ELOAQ14241 798 aaKnown RBP18.51■□□□□ 0.55
PTBP1-219ENST00000621737 INAQ16352 499 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 FAM180AQ6UWF9 173 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 QSOX2Q6ZRP7 698 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 CEP128Q6ZU80 1094 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 CCDC91Q7Z6B0 441 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 ST6GALNAC3Q8NDV1 305 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 PRR7Q8TB68 274 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 M1APQ8TC57 530 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 EXT2Q93063 718 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 WDR34Q96EX3 536 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 PSMG3-AS1Q96PY0 264 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 EFCAB11Q9BUY7 163 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 NMRAL1Q9HBL8 299 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 MMP25Q9NPA2 562 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 NUDT4Q9NZJ9 180 aa18.51■□□□□ 0.55
PTBP1-219ENST00000621737 SPTBN1Q01082 2364 aaKnown RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 BLACEA4D250 179 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 OR5H15A6NDH6 313 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 PSMD12O00232 456 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 B4GALT2O60909 372 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 KERAO60938 352 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 CLEC3AO75596 197 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 LTA4HP09960 611 aaKnown RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 HPDP32754 393 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 PHBP35232 272 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 GMPRP36959 345 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 OR4D2P58180 307 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 ACTN3Q08043 901 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 DLG1Q12959 904 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 XKR6Q5GH73 641 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 H3F3CQ6NXT2 135 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 LRRC70Q7Z2Q7 622 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 ISCA2Q86U28 154 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 MMGT1Q8N4V1 131 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 SSC4DQ8WTU2 575 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 FAR1Q8WVX9 515 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 CCT6BQ92526 530 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 ESAMQ96AP7 390 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 MS4A6EQ96DS6 147 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 PTCD3Q96EY7 689 aaKnown RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 FAR2Q96K12 515 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 ATOH8Q96SQ7 321 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 CD244Q9BZW8 370 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 IGSF5Q9NSI5 407 aa18.5■□□□□ 0.55
PTBP1-219ENST00000621737 MTRF1LQ9UGC7 380 aaKnown RBP18.5■□□□□ 0.55
PTBP1-219ENST00000621737 LRIT2A6NDA9 550 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 A8MUI8 341 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 E2F3O00716 465 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 CCNT2O60583 730 aaKnown RBP18.49■□□□□ 0.55
PTBP1-219ENST00000621737 PRMT3O60678 531 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 PRAMEF4O60810 478 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 F10P00742 488 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 KCNC1P48547 511 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 BTN3A2P78410 334 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 DOC2AQ14183 400 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 ACER2Q5QJU3 275 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 PRAMEF9Q5VWM5 478 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 RELL1Q8IUW5 271 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 CA13Q8N1Q1 262 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 MNS1Q8NEH6 495 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 UBTD2Q8WUN7 234 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 ZNF354BQ96LW1 612 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 PTCHD1Q96NR3 888 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 ACSS3Q9H6R3 686 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 KCNK13Q9HB14 408 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 STMN3Q9NZ72 180 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 NINJ2Q9NZG7 142 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 ACOT9Q9Y305 439 aa18.49■□□□□ 0.55
PTBP1-219ENST00000621737 A0A087X1B8 175 aa18.48■□□□□ 0.55
PTBP1-219ENST00000621737 A0A088AWK7 358 aa18.48■□□□□ 0.55
PTBP1-219ENST00000621737 IGKV3D-11A0A0A0MRZ8 115 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms