RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 EEFSECP57772 596 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 VSX2P58304 361 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ERVPABLB-1P60509 514 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 RUNX3Q13761 415 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TGFBIQ15582 683 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 IER5LQ5T953 404 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 NADSYN1Q6IA69 706 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 GPR153Q6NV75 609 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 LETMD1Q6P1Q0 360 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 AGTRAPQ6RW13 159 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PROSER1Q86XN7 944 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 CROCCP3Q8IVE0 287 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF683Q8IZ20 524 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC22A15Q8IZD6 547 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 GPR150Q8NGU9 434 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TEX47Q8TBZ9 253 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PROKR1Q8TCW9 393 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 MMABQ96EY8 250 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TBL1XR1Q9BZK7 514 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SMURF2Q9HAU4 748 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 HEBP1Q9NRV9 189 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 NLE1Q9NVX2 485 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 HCN3Q9P1Z3 774 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 C3orf18Q9UK00 162 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PCDHB11Q9Y5F2 797 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 EDDM13A0A1B0GTR0 161 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 RBMXL2O75526 392 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 EPOP01588 193 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 KLK3P07288 261 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 JUNDP17535 347 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ST13P50502 369 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 LASP1Q14847 261 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 PTGR1Q14914 329 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 BRAT1Q6PJG6 821 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 HS3ST5Q8IZT8 346 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 UBE2J2Q8N2K1 259 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 DTWD1Q8N5C7 304 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 DDHD1Q8NEL9 900 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 COQ7Q99807 217 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 NUSAP1Q9BXS6 441 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM27Q9HBJ8 222 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 POPDC3Q9HBV1 291 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 MCCC2Q9HCC0 563 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 C1orf109Q9NX04 203 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 STOX2Q9P2F5 926 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 FTSJ1Q9UET6 329 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CA5BQ9Y2D0 317 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 SNRNP200O75643 2136 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 NUP214P35658 2090 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 SCN4AP35499 1836 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 A0A1W2PRB8 838 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 XKRYO14609 159 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 TNFP01375 233 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 C9P02748 559 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 THRBP10828 461 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 HRH2P25021 359 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 HK3P52790 923 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ARSFP54793 590 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 PER3P56645 1201 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 PIGFQ07326 219 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ILF2Q12905 390 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CARTPTQ16568 116 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ALG11Q2TAA5 492 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ARTNQ5T4W7 220 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 TRIQKQ629K1 86 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 OGFOD2Q6N063 350 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CXorf57Q6NSI4 855 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 SPRED1Q7Z699 444 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ALDH16A1Q8IZ83 802 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 C11orf65Q8NCR3 313 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 WFIKKN2Q8TEU8 576 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 FCRL4Q96PJ5 515 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC38A2Q96QD8 506 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CGREF1Q99674 301 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 NDC1Q9BTX1 674 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CEP44Q9C0F1 390 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 MCOLN1Q9GZU1 580 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 LTB4R2Q9NPC1 389 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 C11orf16Q9NQ32 467 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CENPMQ9NSP4 180 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 MCUBQ9NWR8 336 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 MAGEL2Q9UJ55 1249 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 MED16Q9Y2X0 877 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 FAM92AA1XBS5 289 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 C9J4A7 227 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 TFECO14948 347 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 B3GALT2O43825 422 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 KLHL18O94889 574 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 RB1P06400 928 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CD247P20963 164 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 HOXC8P31273 242 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 TTKP33981 857 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 CCR3P51677 355 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 SUOXP51687 545 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF140P52738 457 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF267Q14586 743 aaPredicted RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 LARS2Q15031 903 aaKnown RBP7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 TYSND1Q2T9J0 566 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 EOGTQ5NDL2 527 aa7.98□□□□□ -1.13
PTPDC1-204ENST00000620992 ANXA8L1Q5VT79 327 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms