RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MUTYHQ9UIF7 546 aa18.8■□□□□ 0.6
PDLIM3-212ENST00000620787 SLC16A5O15375 505 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 TNFRSF21O75509 655 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CRATP43155 626 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 LIMS1P48059 325 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 PTPN5P54829 565 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 AP1S2P56377 157 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CDC42P60953 191 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CDH18Q13634 790 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CDK10Q15131 360 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CYP27C1Q4G0S4 372 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ZMAT1Q5H9K5 638 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 PLAG1Q6DJT9 500 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 PRR23CQ6ZRP0 262 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 C1orf52Q8N6N3 182 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 VPS37AQ8NEZ2 397 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 GTPBP3Q969Y2 492 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 COQ8BQ96D53 544 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 TCF25Q9BQ70 676 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 HHATLQ9HCP6 504 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ACER3Q9NUN7 267 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF282Q9UDV7 671 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 A8MV72 311 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 E7EQ34 232 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CYP7B1O75881 506 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CCNB2O95067 398 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ANXA4P09525 319 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 C1SP09871 688 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CBLP22681 906 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CHMP24386 653 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 RPS19P39019 145 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ASMTP46597 345 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 RACK1P63244 317 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 DOC2AQ14183 400 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ADNP2Q6IQ32 1131 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 HJURPQ8NCD3 748 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 FBXO22Q8NEZ5 403 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 GPR151Q8TDV0 419 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 LYSMD1Q96S90 227 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 CNPPD1Q9BV87 410 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ASPNQ9BXN1 380 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 TMEM161AQ9NX61 479 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 OGDHLQ9ULD0 1010 aa18.79■□□□□ 0.6
PDLIM3-212ENST00000620787 ZAR1LA6NP61 321 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 SH3BGRLO75368 114 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF79Q15937 498 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF385BQ569K4 471 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 CCSAPQ6IQ19 270 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 ANGPTL8Q6UXH0 198 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 VN1R5Q7Z5H4 357 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 RAB43Q86YS6 212 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 TBC1D14Q9P2M4 693 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 TMPRSS11EQ9UL52 423 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 HCN4Q9Y3Q4 1203 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 H3BM21 787 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 SEPT4O43236 478 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF821O75541 412 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 RPL17P18621 184 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 HNF4AP41235 474 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 XCR1P46094 333 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 CSNK1DP48730 415 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 MRPS15P82914 257 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 SCARB2Q14108 478 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 BAK1Q16611 211 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 RETSATQ6NUM9 610 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 SERPINA13PQ6UXR4 307 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 NFKBIDQ8NI38 313 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 METTL2AQ96IZ6 378 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 DMRTB1Q96MA1 342 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 MAPKAP1Q9BPZ7 522 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 EXO1Q9UQ84 846 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 LSM2Q9Y333 95 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 KIAA1671Q9BY89 1806 aa18.78■□□□□ 0.6
PDLIM3-212ENST00000620787 RNASET2O00584 256 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 SCG5P05408 212 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 ITGA2P17301 1181 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 GCNT6Q5T4J0 391 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 ZNF648Q5T619 568 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 KLHL17Q6TDP4 642 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 PTCHD4Q6ZW05 846 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 THOC6Q86W42 341 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 C2orf69Q8N8R5 385 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 VANGL1Q8TAA9 524 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 VOPP1Q96AW1 172 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 CASD1Q96PB1 797 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 PIP5K1AQ99755 562 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 CLN6Q9NWW5 311 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 SH3BP4Q9P0V3 963 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 CCDC88CQ9P219 2028 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 CENPXA8MT69 81 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 RGS5O15539 181 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 PIPP12273 146 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 CNR2P34972 360 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 MAPK8P45983 427 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 HMGA2P52926 109 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 PTSQ03393 145 aa18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 ELOAQ14241 798 aaKnown RBP18.77■□□□□ 0.6
PDLIM3-212ENST00000620787 PLEKHS1Q5SXH7 462 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms