RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZDHHC7Q9NXF8 308 aa10.99□□□□□ -0.65
CLIP1-219ENST00000620786 UBAP1Q9NZ09 502 aa10.99□□□□□ -0.65
CLIP1-219ENST00000620786 FEZF1A0PJY2 475 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF878C9JN71 531 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 CH25HO95992 272 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 AGTR2P50052 363 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 OR2B6P58173 313 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 PMS2P3Q13401 168 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 GBX1Q14549 363 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 LIPJQ5W064 366 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 RABEPKQ7Z6M1 372 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 TMEM25Q86YD3 366 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 TLCD1Q96CP7 247 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 OR1F2PQ96R84 312 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 POFUT2Q9Y2G5 429 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 H3BSH0 61 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 CHP2O43745 196 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 RPLP0P05388 317 aaKnown RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 C1GALT1C1LP0DN25 315 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 RAB39AQ14964 217 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 RAET1LQ5VY80 246 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 TTLL10Q6ZVT0 673 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 LINC00471Q8N535 108 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 SLC22A8Q8TCC7 542 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 CPNE2Q96FN4 548 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 PRR11Q96HE9 360 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 RBP7Q96R05 134 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 UCK2Q9BZX2 261 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 PCDHAC1Q9H158 963 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 CIB4A0PJX0 185 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 EME2A4GXA9 379 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 E7ENX8 843 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 K7ERQ8 282 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 PLD2O14939 933 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ARPC2O15144 300 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 EPOP01588 193 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ADRB3P13945 408 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 UQCRC2P22695 453 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 BNIP1Q12981 228 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 IRF5Q13568 498 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF630Q2M218 657 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 EMC10Q5UCC4 262 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 CARD17Q5XLA6 110 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 STX12Q86Y82 276 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 SDR16C5Q8N3Y7 309 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 TM9SF2Q99805 663 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 REEP4Q9H6H4 257 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 KCNK13Q9HB14 408 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 SLCO3A1Q9UIG8 710 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 GNG8Q9UK08 70 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 OARD1Q9Y530 152 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 NR4A1P22736 598 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 SLC6A6P31641 620 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ABATP80404 500 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 SLAMF1Q13291 335 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 LRP8Q14114 963 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ODF4Q2M2E3 257 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 RBM48Q5RL73 367 aaKnown RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
CLIP1-219ENST00000620786 IMP4Q96G21 291 aaKnown RBP10.98□□□□□ -0.65
CLIP1-219ENST00000620786 A0A1W2PRQ8 180 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 CSN2P05814 226 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ETS2P15036 469 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 GLDCP23378 1020 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 DNAJB1P25685 340 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 SUOXP51687 545 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 RPS3AP61247 264 aaKnown RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 DEFB134Q4QY38 66 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 IL17FQ96PD4 163 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 POLR2J2Q9GZM3 115 aaKnown RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 COQ10BQ9H8M1 238 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 TPT1P8Q9HAU6 139 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 BRF2Q9HAW0 419 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PCDHB14Q9Y5E9 798 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PCDHGA3Q9Y5H0 932 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 A0A1B0GVI7 797 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 C11orf98E9PRG8 122 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 IFI30P13284 250 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ARSAP15289 507 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 FUT4P22083 530 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 GGT5P36269 586 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF84P51523 738 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 FGL2Q14314 439 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 NR0B2Q15466 257 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ASTE1Q2TB18 679 aaPredicted RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF678Q5SXM1 525 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PAMR1Q6UXH9 720 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF550Q7Z398 422 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 FAM86B1Q8N7N1 296 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 AQP11Q8NBQ7 271 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.97□□□□□ -0.655e-8■■■■■ 43.8
CLIP1-219ENST00000620786 FANK1Q8TC84 345 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 SMURF1Q9HCE7 757 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 J3QLW9 94 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 M0QX08 132 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms