RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 NSDHLQ15738 373 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 ACER2Q5QJU3 275 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 ABHD13Q7L211 337 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 ADAMTSL2Q86TH1 951 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 THOC6Q86W42 341 aaKnown RBP20.7■□□□□ 0.9
SRRT-218ENST00000620394 KLHDC8AQ8IYD2 350 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 BEST3Q8N1M1 668 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 UTP15Q8TED0 518 aaKnown RBP20.7■□□□□ 0.9
SRRT-218ENST00000620394 C14orf79Q96F83 325 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 PDLIM2Q96JY6 352 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 LPAR4Q99677 370 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 NPAS2Q99743 824 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 TRIM31Q9BZY9 425 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 POPDC3Q9HBV1 291 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 DYRK1BQ9Y463 629 aa20.7■□□□□ 0.9
SRRT-218ENST00000620394 CTAGE15A4D2H0 777 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 CHST10O43529 356 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 ZNF888P0CJ79 500 aaPredicted RBP20.69■□□□□ 0.9
SRRT-218ENST00000620394 ESRRAP11474 423 aaPredicted RBP20.69■□□□□ 0.9
SRRT-218ENST00000620394 HNMTP50135 292 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 HYAL2Q12891 473 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 NXPE4Q6UWF7 544 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 TMPRSS11BQ86T26 416 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 CTAGE6Q86UF2 777 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 CDH24Q86UP0 819 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 LGI4Q8N135 537 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 MDS2Q8NDY4 140 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 TRPV3Q8NET8 790 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 VPS39Q96JC1 886 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 MAGED4Q96JG8 741 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 AIF1LQ9BQI0 150 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 KCNK13Q9HB14 408 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 KCNE2Q9Y6J6 123 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 ZFHX3Q15911 3703 aa20.69■□□□□ 0.9
SRRT-218ENST00000620394 DNAJB6O75190 326 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 CLDN14O95500 239 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 SMIM10L1P0DMW3 83 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 PAFAH1B1P43034 410 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 SLC6A12P48065 614 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 SLC26A5P58743 744 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 TUBA3CQ13748 450 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 MEP1AQ16819 746 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 TUBA3EQ6PEY2 450 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 QSOX2Q6ZRP7 698 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 CRLF3Q8IUI8 442 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 CEP97Q8IW35 865 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 ANKRD49Q8WVL7 239 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 MTFMTQ96DP5 389 aaKnown RBP20.68■□□□□ 0.9
SRRT-218ENST00000620394 SMIM10Q96HG1 83 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 SLC22A14Q9Y267 594 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 DCHS2Q6V1P9 2916 aa20.68■□□□□ 0.9
SRRT-218ENST00000620394 SETD2Q9BYW2 2564 aaPredicted RBP20.68■□□□□ 0.9
SRRT-218ENST00000620394 IGKV3D-11A0A0A0MRZ8 115 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 URADA6NGE7 173 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 A8MUI8 341 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 CDK2AP1O14519 115 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 B3GALT4O96024 378 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 SERPIND1P05546 499 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 SERPINA6P08185 405 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 SAT1P21673 171 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 OR4D2P58180 307 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 OLR1P78380 273 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 C3AR1Q16581 482 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 ZNF766Q5HY98 468 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 FCRLBQ6BAA4 426 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 ZBED8Q8IZ13 594 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 SLC5A8Q8N695 610 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 BBOF1Q8ND07 529 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 CREB3L4Q8TEY5 395 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 KRT12Q99456 494 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 AICDAQ9GZX7 198 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 SMYD2Q9NRG4 433 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 TINAGQ9UJW2 476 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 SNX24Q9Y343 169 aa20.67■□□□□ 0.9
SRRT-218ENST00000620394 C4orf51C9J302 202 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 C19orf84I3L1E1 186 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 MLYCDO95822 493 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 PMP22Q01453 160 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 TSNQ15631 228 aaKnown RBP20.66■□□□□ 0.9
SRRT-218ENST00000620394 ELP5Q8TE02 316 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 CHTF18Q8WVB6 975 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 RHBDF1Q96CC6 855 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 SCMH1Q96GD3 660 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 EGFL8Q99944 293 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 DERL2Q9GZP9 239 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 GPAMQ9HCL2 828 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 CTNNAL1Q9UBT7 734 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 PYCARDQ9ULZ3 195 aa20.66■□□□□ 0.9
SRRT-218ENST00000620394 MAN1A2O60476 641 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 TAS2R50P59544 299 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 POU4F1Q01851 419 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 SRSF11Q05519 484 aaKnown RBP20.65■□□□□ 0.9
SRRT-218ENST00000620394 ACTN3Q08043 901 aaPredicted RBP20.65■□□□□ 0.9
SRRT-218ENST00000620394 SLCO4C1Q6ZQN7 724 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.65■□□□□ 0.9
SRRT-218ENST00000620394 THAP3Q8WTV1 239 aaPredicted RBP20.65■□□□□ 0.9
SRRT-218ENST00000620394 SIGLEC12Q96PQ1 595 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 SPOCK3Q9BQ16 436 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 WHRNQ9P202 907 aa20.65■□□□□ 0.9
SRRT-218ENST00000620394 TCRBV16S1A1N1A0A5B0 115 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms