RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 EGFL8Q99944 293 aa11.18□□□□□ -0.62
UPF3B-204ENST00000619445 NPLQ9BXD5 320 aaPredicted RBP11.18□□□□□ -0.62
UPF3B-204ENST00000619445 TRIM45Q9H8W5 580 aaPredicted RBP11.18□□□□□ -0.62
UPF3B-204ENST00000619445 CNOT10Q9H9A5 744 aaKnown RBP11.18□□□□□ -0.62
UPF3B-204ENST00000619445 GPAMQ9HCL2 828 aa11.18□□□□□ -0.62
UPF3B-204ENST00000619445 CHMP2BQ9UQN3 213 aa11.18□□□□□ -0.62
UPF3B-204ENST00000619445 MRPS33Q9Y291 106 aaKnown RBP11.18□□□□□ -0.62
UPF3B-204ENST00000619445 ZNF835Q9Y2P0 537 aa11.18□□□□□ -0.62
UPF3B-204ENST00000619445 OARD1Q9Y530 152 aa11.18□□□□□ -0.62
UPF3B-204ENST00000619445 TCRBV16S1A1N1A0A5B0 115 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 ARHGAP10A1A4S6 786 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CLDN4O14493 209 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 B4GALT2O60909 372 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SLC25A12O75746 678 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 NEURL1O76050 574 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SEC31AO94979 1220 aaKnown RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 ZNF24P17028 368 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 PAFAH1B1P43034 410 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SNRPNP63162 240 aaKnown RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CBLBQ13191 982 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 RBBP5Q15291 538 aaKnown RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 ZNF630Q2M218 657 aaPredicted RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CATSPEREQ5SY80 951 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 FCRLBQ6BAA4 426 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SPINK14Q6IE38 97 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 GDF7Q7Z4P5 450 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 TMPRSS11BQ86T26 416 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 ZC3HC1Q86WB0 502 aaKnown RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SPPL2CQ8IUH8 684 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 IGDCC3Q8IVU1 814 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 KRT78Q8N1N4 520 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CDKL2Q92772 493 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 TSLPQ969D9 159 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 GAL3ST3Q96A11 431 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 TSPAN17Q96FV3 270 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 FRMD6Q96NE9 622 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SIGLEC12Q96PQ1 595 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 RBCK1Q9BYM8 510 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 DEFB126Q9BYW3 111 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 RHOJQ9H4E5 214 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CDCP1Q9H5V8 836 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 NT5DC2Q9H857 520 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 KLHL1Q9NR64 748 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 GPRC5BQ9NZH0 403 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 CTNNAL1Q9UBT7 734 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 SLC22A14Q9Y267 594 aa11.17□□□□□ -0.62
UPF3B-204ENST00000619445 KLF13Q9Y2Y9 288 aaPredicted RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 NCOA6Q14686 2063 aaPredicted RBP11.17□□□□□ -0.62
UPF3B-204ENST00000619445 IGKV3D-11A0A0A0MRZ8 115 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 FAM95CA0A1B0GW59 222 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 OR2W5A6NFC9 320 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 FAM227AF5H4B4 570 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 KLRC4-KLRK1H3BQV0 150 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ASNA1O43681 348 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 NME2P1O60361 137 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 BANF1O75531 89 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 SMIM10L1P0DMW3 83 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 C1GALT1C1LP0DN25 315 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 COX6B1P14854 86 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 NME2P22392 152 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ELAVL4P26378 380 aaKnown RBP11.16□□□□□ -0.62
UPF3B-204ENST00000619445 HTR1EP28566 365 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 HLCSP50747 726 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 CLCN2P51788 898 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 HSD17B7P56937 341 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 MLF1P58340 268 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 PMP22Q01453 160 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 POU4F1Q01851 419 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 TGM3Q08188 693 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 MAPKAPK3Q16644 382 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ZXDCQ2QGD7 858 aaPredicted RBP11.16□□□□□ -0.62
UPF3B-204ENST00000619445 TRMT10BQ6PF06 316 aaKnown RBP11.16□□□□□ -0.62
UPF3B-204ENST00000619445 TMIGD1Q6UXZ0 262 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 GALNTL5Q7Z4T8 443 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 MCEMP1Q8IX19 187 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 KLHDC8AQ8IYD2 350 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 PHF10Q8WUB8 498 aaKnown RBP11.16□□□□□ -0.62
UPF3B-204ENST00000619445 SMIM10Q96HG1 83 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 TSNARE1Q96NA8 513 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 CCDC77Q9BR77 488 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 MOCS1Q9NZB8 636 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 TXNDC16Q9P2K2 825 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 SAR1BQ9Y6B6 198 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 E7ESA3 106 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 NPIPA5E9PKD4 350 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 PRRG2O14669 202 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 B3GALT2O43825 422 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 CLEC3AO75596 197 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ABOP16442 354 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 SAT1P21673 171 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ITGA8P53708 1063 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 RAB8AP61006 207 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 PDIA2Q13087 525 aaKnown RBP11.16□□□□□ -0.62
UPF3B-204ENST00000619445 GPALPP1Q8IXQ4 340 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ZNF595Q8IYB9 648 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 ANKRD53Q8N9V6 530 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 B3GNT7Q8NFL0 401 aa11.16□□□□□ -0.62
UPF3B-204ENST00000619445 VMP1Q96GC9 406 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms