RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	COQ10A	Q96MF6	247 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	EPYC	Q99645	322 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	FAM83C	Q9BQN1	747 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	ACOT13	Q9NPJ3	140 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	DMRT3	Q9NQL9	472 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	SELENON	Q9NZV5	590 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
TP53-223	ENST00000618944	SH3GLB1	Q9Y371	365 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	PCDHGB1	Q9Y5G3	927 aa		10.75	□□□□□ -0.69
TP53-223	ENST00000618944	UNC80	Q8N2C7	3258 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CARNS1	A5YM72	827 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PRAMEF25	A6NGN4	478 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	LILRB5	O75023	590 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NADK	O95544	446 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ADH5	P11766	374 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PCGF2	P35227	344 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	SPIB	Q01892	262 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	OCA2	Q04671	838 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	SCARB2	Q14108	478 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	SLC5A12	Q1EHB4	618 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	FNDC3B	Q53EP0	1204 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CAMKMT	Q7Z624	323 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ZNF554	Q86TJ5	538 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ZNF547	Q8IVP9	402 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NRSN1	Q8IZ57	195 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CPA6	Q8N4T0	437 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	SLC5A11	Q8WWX8	675 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ARRDC3	Q96B67	414 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	REPS1	Q96D71	796 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	YIPF6	Q96EC8	236 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ATP6V1H	Q9UI12	483 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CORO2B	Q9UQ03	480 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	RNF6	Q9Y252	685 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	SNX8	Q9Y5X2	465 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CFAP20	Q9Y6A4	193 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	HSPE1-MOB4	S4R3N1	261 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	EFCAB14	O75071	495 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	TNFRSF21	O75509	655 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	FURIN	P09958	794 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	C6	P13671	934 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PPIB	P23284	216 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	C21orf33	P30042	268 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	IDH2	P48735	452 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ST13	P50502	369 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CCR3	P51677	355 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NUDT6	P53370	316 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CXCR4	P61073	352 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PPIG	Q13427	754 aa	Known RBP eCLIP	10.74	□□□□□ -0.69	6e-7	■■□□□ 12.6
TP53-223	ENST00000618944	SYT16	Q17RD7	645 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	ZNF658B	Q4V348	819 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PAGE2B	Q5JRK9	111 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	GCNT6	Q5T4J0	391 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	SYT6	Q5T7P8	510 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NXPE4	Q6UWF7	544 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	P2RY8	Q86VZ1	359 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	P3H2	Q8IVL5	708 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	KLHDC8A	Q8IYD2	350 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PROX1	Q92786	737 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	TAMM41	Q96BW9	452 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NUS1	Q96E22	293 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	METTL2A	Q96IZ6	378 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NIPSNAP1	Q9BPW8	284 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	CRISPLD2	Q9H0B8	497 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	RHCG	Q9UBD6	479 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	PADI2	Q9Y2J8	665 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	MRPS23	Q9Y3D9	190 aa	Known RBP	10.74	□□□□□ -0.69
TP53-223	ENST00000618944	LYVE1	Q9Y5Y7	322 aa		10.74	□□□□□ -0.69
TP53-223	ENST00000618944	DENND4C	Q5VZ89	1909 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	OTOL1	A6NHN0	477 aa	Predicted RBP	10.73	□□□□□ -0.69
TP53-223	ENST00000618944		M0R129	80 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	RTCA	O00442	366 aa	Known RBP	10.73	□□□□□ -0.69
TP53-223	ENST00000618944	GPR37L1	O60883	481 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	DNAJB5	O75953	348 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	GABARAP	O95166	117 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	FGF19	O95750	216 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	FUCA1	P04066	466 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	SRPRA	P08240	638 aa	Known RBP	10.73	□□□□□ -0.69
TP53-223	ENST00000618944	IL3	P08700	152 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	ACVR2A	P27037	513 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	DGKE	P52429	567 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	PNLIPRP1	P54315	467 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	CYP4F2	P78329	520 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	PCDH1	Q08174	1060 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	TEAD4	Q15561	434 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	EXOC3L2	Q2M3D2	409 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	PROX2	Q3B8N5	592 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	PRSS36	Q5K4E3	855 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	PERM1	Q5SV97	790 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	EGFLAM	Q63HQ2	1017 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.73	□□□□□ -0.69
TP53-223	ENST00000618944	OR10G2	Q8NGC3	310 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	OR9Q2	Q8NGE9	314 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	OR5AR1	Q8NGP9	310 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	UTP15	Q8TED0	518 aa	Known RBP	10.73	□□□□□ -0.69
TP53-223	ENST00000618944	RSPRY1	Q96DX4	576 aa		10.73	□□□□□ -0.69
TP53-223	ENST00000618944	LRIG1	Q96JA1	1093 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms