RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 MTFMTQ96DP5 389 aaKnown RBP18.72■□□□□ 0.59
UPF3A-211ENST00000618700 F2RL3Q96RI0 385 aa18.72■□□□□ 0.59
UPF3A-211ENST00000618700 REXO4Q9GZR2 422 aaKnown RBP18.72■□□□□ 0.59
UPF3A-211ENST00000618700 OR51B5Q9H339 312 aa18.72■□□□□ 0.59
UPF3A-211ENST00000618700 TRAF6Q9Y4K3 522 aa18.72■□□□□ 0.59
UPF3A-211ENST00000618700 MEN1O00255 615 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 NSA2O95478 260 aaKnown RBP18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ONECUT2O95948 504 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 CAPNS1P04632 268 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 HSD3B1P14060 373 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ALOX12P18054 663 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 IL1RNP18510 177 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 PTX3P26022 381 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-211ENST00000618700 HSD3B2P26439 372 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 SERPINB3P29508 390 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 CUL3Q13618 768 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ABRAXAS2Q15018 415 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 HERC3Q15034 1050 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 SGO1Q5FBB7 561 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 C1orf189Q5VU69 101 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 PRMT9Q6P2P2 845 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ABHD17CQ6PCB6 329 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 C6orf15Q6UXA7 325 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-211ENST00000618700 UBE3DQ7Z6J8 389 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 PDSS2Q86YH6 399 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 HOMEZQ8IX15 550 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 CLYBLQ8N0X4 340 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ZNF781Q8N8C0 355 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 AGR3Q8TD06 166 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 HBEGFQ99075 208 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 SERPINI1Q99574 410 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ACPTQ9BZG2 426 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 ILKAPQ9H0C8 392 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-211ENST00000618700 DNAJC15Q9Y5T4 150 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 SEC16AO15027 2179 aa18.71■□□□□ 0.59
UPF3A-211ENST00000618700 A0A0A6YYC8 382 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-211ENST00000618700 I3L1I5 382 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-211ENST00000618700 ERI3O43414 337 aaKnown RBP18.7■□□□□ 0.58
UPF3A-211ENST00000618700 RAD1O60671 282 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 KLHL18O94889 574 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 SEMA3DO95025 777 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 ALAS2P22557 587 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 RAB8AP61006 207 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 NKAIN1Q4KMZ8 207 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 UNQ6494/PRO21346Q6UXR6 183 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 RGS9BPQ6ZS82 235 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 CHSY3Q70JA7 882 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 TRIM46Q7Z4K8 759 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 KIRREL3Q8IZU9 778 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 NLGN4XQ8N0W4 816 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 ESX1Q8N693 406 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 GBP7Q8N8V2 638 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-211ENST00000618700 NLGN4YQ8NFZ3 816 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-211ENST00000618700 OR9A4Q8NGU2 314 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 FAM76AQ8TAV0 307 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 LRRC8CQ8TDW0 803 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 MAGEB18Q96M61 343 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 QRFPRQ96P65 431 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 DPH2Q9BQC3 489 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-211ENST00000618700 TUBB1Q9H4B7 451 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 ANKHQ9HCJ1 492 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 SLC22A11Q9NSA0 550 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 NDOR1Q9UHB4 597 aa18.7■□□□□ 0.58
UPF3A-211ENST00000618700 H0YIG0 161 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 PLPP1O14494 284 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 GALR3O60755 368 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 SH3BGRLO75368 114 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 B3GALT4O96024 378 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 LIPCP11150 499 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 ARFIP1P53367 373 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 PLA2G16P53816 162 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 ABHD18Q0P651 414 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 DEFB134Q4QY38 66 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 LCN10Q6JVE6 187 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 TRIM40Q6P9F5 258 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 SCIMPQ6UWF3 145 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 COX15Q7KZN9 410 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 METTL27Q8N6F8 245 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 AMER3Q8N944 861 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 SRFBP1Q8NEF9 429 aaKnown RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 SNIP1Q8TAD8 396 aaKnown RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 TWIST2Q8WVJ9 160 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 KCNC2Q96PR1 638 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 C17orf62Q9BQA9 187 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 ZNF717Q9BY31 904 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 CCDC86Q9H6F5 360 aaKnown RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 AKIRIN1Q9H9L7 192 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-211ENST00000618700 LHX9Q9NQ69 397 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 CDC14AQ9UNH5 594 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 FIS1Q9Y3D6 152 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 NAALAD2Q9Y3Q0 740 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 CCL27Q9Y4X3 112 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 PTGDR2Q9Y5Y4 395 aa18.69■□□□□ 0.58
UPF3A-211ENST00000618700 C1QTNF9BB2RNN3 333 aa18.68■□□□□ 0.58
UPF3A-211ENST00000618700 SAP18O00422 153 aaKnown RBP18.68■□□□□ 0.58
UPF3A-211ENST00000618700 TLX3O43711 291 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-211ENST00000618700 SCELO95171 688 aa18.68■□□□□ 0.58
UPF3A-211ENST00000618700 CHEK2O96017 543 aa18.68■□□□□ 0.58
UPF3A-211ENST00000618700 KLK3P07288 261 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms