RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ITGA10O75578 1167 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZFAND5O76080 213 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CNOT4O95628 575 aaKnown RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 PECAM1P16284 738 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 PPP3CBP16298 524 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PAMP19021 973 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 MSNP26038 577 aaKnown RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 CDKN1CP49918 316 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZNF136P52737 540 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZBED6P86452 979 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CRYZQ08257 329 aaKnown RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 PTPRCAPQ14761 206 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ASTE1Q2TB18 679 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 FCRLBQ6BAA4 426 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 DTWD1Q8N5C7 304 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ARMC2Q8NEN0 867 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 OR13J1Q8NGT2 312 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZFAND2BQ8WV99 257 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 UCN3Q969E3 161 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 DTNBP1Q96EV8 351 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TMEM204Q9BSN7 226 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 RBSNQ9H1K0 784 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 NUP62CLQ9H1M0 184 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TSPAN10Q9H1Z9 355 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 FAM96AQ9H5X1 160 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ELOVL5Q9NYP7 299 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 UBP1Q9NZI7 540 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CDC42EP3Q9UKI2 254 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 KLHL20Q9Y2M5 609 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PCDHA3Q9Y5H8 950 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 COMMD10Q9Y6G5 202 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 FAM170AA1A519 330 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 PINLYPA6NC86 204 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 LRRC14BA6NHZ5 514 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 DEFB108AA8MXU0 73 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 AP3B1O00203 1094 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CTIFO43310 598 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 CHMP24386 653 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 UQCRC1P31930 480 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 SP140Q13342 867 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 GAB1Q13480 694 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 SLC10A1Q14973 349 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 P3H1Q32P28 736 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 TSTD2Q5T7W7 516 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 LRRC8EQ6NSJ5 796 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 C11orf63Q6NUN7 778 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ALKBH5Q6P6C2 394 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 OPN5Q6U736 354 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 LCTLQ6UWM7 567 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 C3P1Q6ZMU1 363 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 TAS2R42Q7RTR8 314 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ASPGQ86U10 573 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 MEX3DQ86XN8 651 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 PDSS2Q86YH6 399 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 RASGEF1CQ8N431 466 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.23□□□□□ -1.73
SNCA-213ENST00000618500 CLDN19Q8N6F1 224 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 NUBPLQ8TB37 319 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 LKAAEAR1Q8TD35 194 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 PAQR8Q8TEZ7 354 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CTNNBL1Q8WYA6 563 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 IL17FQ96PD4 163 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 TCF12Q99081 682 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CCDC77Q9BR77 488 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 DEFB126Q9BYW3 111 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ADAP2Q9NPF8 381 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ANO10Q9NW15 660 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 PSD3Q9NYI0 1048 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CAPN11Q9UMQ6 739 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 BOKQ9UMX3 212 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 LIPGQ9Y5X9 500 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ANKHD1Q8IWZ3 2542 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 GTF3C1Q12789 2109 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 FBN1P35555 2871 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 POLQO75417 2590 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 TRBC2A0A5B9 178 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CCDC162PA2VCL2 907 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 GFYI3L273 518 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 OVOL3O00110 214 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 PRMT5O14744 637 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 SLC16A5O15375 505 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 RCBTB2O95199 551 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CPN1P15169 458 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CTNNA2P26232 953 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 PSMB5P28074 263 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 AHRP35869 848 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 HSD17B7P56937 341 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 CBLBQ13191 982 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ABRAXAS2Q15018 415 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 SIX1Q15475 284 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 NSDHLQ15738 373 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 SLC18A3Q16572 532 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 STX1AQ16623 288 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 SYT16Q17RD7 645 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ZNF791Q3KP31 576 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 PIGGQ5H8A4 983 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 MEI1Q5TIA1 1274 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ZNF585AQ6P3V2 769 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms