RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MUC22E2RYF6 1773 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 A0A1W2PQU0 124 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 NPIPB8E9PQR5 432 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 OR1F1O43749 312 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 PRMT3O60678 531 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 LAMP2P13473 410 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 MAPK9P45984 424 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 PPP2R2BQ00005 443 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 CCNYL2Q5T2Q4 361 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 GPR141Q7Z602 305 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 OR52J3Q8NH60 311 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 ZFP90Q8TF47 636 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 UCN3Q969E3 161 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 RAB7BQ96AH8 199 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 MBOAT4Q96T53 435 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 GPATCH2Q9NW75 528 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 EBF1Q9UH73 591 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 ARHGEF17Q96PE2 2063 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 CHI3L1P36222 383 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 CLDN2P57739 230 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 CYP2A13Q16696 494 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 GPR107Q5VW38 600 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 METRNLQ641Q3 311 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 OR2T5Q6IEZ7 315 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 B3GNT6Q6ZMB0 384 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 TMEM26Q6ZUK4 368 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 KCTD8Q6ZWB6 473 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 RNF130Q86XS8 419 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 LAS2Q8IYD9 372 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 C8orf59Q8N0T1 100 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 OR2T29Q8NH02 315 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 OR5K1Q8NHB7 308 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 OR5K2Q8NHB8 316 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 INSM2Q96T92 566 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 CCDC90BQ9GZT6 254 aa11.88□□□□□ -0.51
CIITA-212ENST00000618207 PDP1Q9P0J1 537 aaPredicted RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 SAMHD1Q9Y3Z3 626 aaKnown RBP11.88□□□□□ -0.51
CIITA-212ENST00000618207 MDC1Q14676 2089 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 C1orf226A1L170 272 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 PLPP1O14494 284 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 MAN1A2O60476 641 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 KLHL18O94889 574 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 FABP3P05413 133 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 FURINP09958 794 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 EPHA2P29317 976 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 PRIM2P49643 509 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 ESRRGP62508 458 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 SLC5A12Q1EHB4 618 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 CPZQ66K79 652 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 ADAMTSL4Q6UY14 1074 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 CYP4Z1Q86W10 505 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 AMER3Q8N944 861 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 LINC01555Q8NAE3 123 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 FBXO15Q8NCQ5 510 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 CNIH3Q8TBE1 160 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 RBM4BQ9BQ04 359 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 RBM4Q9BWF3 364 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 ASPSCR1Q9BZE9 553 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 NAA50Q9GZZ1 169 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 RSL24D1Q9UHA3 163 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 AP3M1Q9Y2T2 418 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 H0Y8X5 98 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 K7EQS6 105 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 SH3BP5O60239 455 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 LCMT2O60294 686 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 POU2F2P09086 479 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 NR4A1P22736 598 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 CRYBA2P53672 197 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 IL5RAQ01344 420 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 KCTD21Q4G0X4 260 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 ANXA8L1Q5VT79 327 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 USP51Q70EK9 711 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 R3HCC1LQ7Z5L2 792 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 THAP5Q7Z6K1 395 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 DCP2Q8IU60 420 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 KRT78Q8N1N4 520 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 ATG16L2Q8NAA4 619 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 BPIFB6Q8NFQ5 453 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 NFKBIDQ8NI38 313 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 EPB41L1Q9H4G0 881 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 IL1RAPQ9NPH3 570 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 PRDM8Q9NQV8 689 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 PADI4Q9UM07 663 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 TESMINQ9Y4I5 508 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 TDRD6O60522 2096 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 LOC100130705A0A1B0GUX0 176 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 GLOD5A6NK44 160 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 KMOO15229 486 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms