RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LILRB1Q8NHL6 650 aaPredicted RBP6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 FAM216AQ8WUB2 273 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 SLC44A1Q8WWI5 657 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 MAML1Q92585 1016 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 AKAP1Q92667 903 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 KAT2AQ92830 837 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 HSPBAP1Q96EW2 488 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 IL1RL2Q9HB29 575 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 TUBA8Q9NY65 449 aaPredicted RBP6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 ADAMTS6Q9UKP5 1117 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 ERVK-11Q9UQG0 969 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 FAM169AQ9Y6X4 670 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 EML6Q6ZMW3 1958 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 KRT87PA6NCN2 255 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 MBD3L3A6NE82 208 aaPredicted RBP6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 LRRC10BA6NIK2 292 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SIGLEC16A6NMB1 481 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 A8MXE2 369 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 P2RX6O15547 441 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 KLF4O43474 513 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 OR6B1O95007 311 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 IL18BPO95998 194 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 THBDP07204 575 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 DANCRP0C864 163 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 CD8BP10966 210 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 PON1P27169 355 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 ACADLP28330 430 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SRP14P37108 136 aaKnown RBP6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 XCR1P46094 333 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SLCO1A2P46721 670 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 AGTR2P50052 363 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 CCR8P51685 355 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 OR4D2P58180 307 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 RHAGQ02094 409 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 NSDHLQ15738 373 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 XKR6Q5GH73 641 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 IL20RBQ6UXL0 311 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SH2D5Q6ZV89 423 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 PEG10Q86TG7 708 aaKnown RBP6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SLC26A11Q86WA9 606 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 LRRC56Q8IYG6 542 aaPredicted RBP6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 GCNT2Q8N0V5 402 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 CSNK1A1LQ8N752 337 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 OR5K2Q8NHB8 316 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 MBD3L2Q8NHZ7 208 aaPredicted RBP6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 NEUROG1Q92886 237 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 MVB12AQ96EY5 273 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 HS6ST2Q96MM7 605 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 MIPEPQ99797 713 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 DRC3Q9H069 523 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SAP130Q9H0E3 1048 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 SMOXQ9NWM0 555 aa6.26□□□□□ -1.41
SCAMP1-206ENST00000618166 DYNC2H1Q8NCM8 4307 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 C15orf38-AP3S2A0A0A6YYH1 394 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 KLHL33A6NCF5 533 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 MFSD11O43934 449 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 PRKNO60260 465 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 TSPAN15O95858 294 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 PRB2P02812 416 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 CHRNB2P17787 502 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 PTNP21246 168 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 CES1P23141 567 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 HMGCLP35914 325 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 HCAR3P49019 387 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 FMO1Q01740 532 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 CRYZQ08257 329 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 GRB7Q14451 532 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 VAX1Q5SQQ9 334 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 DCST1Q5T197 706 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 RNF187Q5TA31 235 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 SEZ6L2Q6UXD5 910 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 DNAJC14Q6Y2X3 702 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 GK5Q6ZS86 529 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 TBC1D21Q8IYX1 336 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 ZNF525Q8N782 197 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 CNTD1Q8N815 330 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 NUP43Q8NFH3 380 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 OR51Q1Q8NH59 317 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 NEIL3Q8TAT5 605 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 RAB3IL1Q8TBN0 382 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 ZNF398Q8TD17 642 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 INTS12Q96CB8 462 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 CSPG4P5Q96PW8 444 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 FAM111AQ96PZ2 611 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 PCDHB18PQ96TA0 734 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 TIMP4Q99727 224 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 FAM173AQ9BQD7 235 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 SOX7Q9BT81 388 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 DEFB126Q9BYW3 111 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 XPO4Q9C0E2 1151 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 FAM96AQ9H5X1 160 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 LUC7LQ9NQ29 371 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 INTS7Q9NVH2 962 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 ZNHIT6Q9NWK9 470 aaKnown RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.25□□□□□ -1.415e-9■■■□□ 15.9
SCAMP1-206ENST00000618166 ZNF223Q9UK11 482 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 HPSEQ9Y251 543 aa6.25□□□□□ -1.41
SCAMP1-206ENST00000618166 DTX4Q9Y2E6 619 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms