RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 RAVER1Q8IY67 606 aaKnown RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 CLDN19Q8N6F1 224 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 FAM46DQ8NEK8 389 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 COQ8BQ96D53 544 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ZC3HAV1LQ96H79 300 aaKnown RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 FRMD6Q96NE9 622 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 SAMD11Q96NU1 681 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 PIP5K1AQ99755 562 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 EBPLQ9BY08 206 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ARHGAP39Q9C0H5 1083 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ZFYVE1Q9HBF4 777 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 IL26Q9NPH9 171 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ABCB8Q9NUT2 735 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 TAS2R16Q9NYV7 291 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 KIAA1671Q9BY89 1806 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 B4GALT3O60512 393 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 TSPAN3O60637 253 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 TNFRSF21O75509 655 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 HLA-DQB1P01920 261 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 CPN2P22792 545 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 PSMA1P25786 263 aaKnown RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 ATP5C1P36542 298 aaKnown RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 NSG1P42857 185 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 RHOAP61586 193 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 MLLT11Q13015 90 aaPredicted RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 PTGES3Q15185 160 aaKnown RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 CDKN3Q16667 212 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 CTXN3Q4LDR2 81 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 GCNT6Q5T4J0 391 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 HSDL2Q6YN16 418 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 PTCHD4Q6ZW05 846 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ZNF767PQ75MW2 155 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 LAX1Q8IWV1 398 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 LAS2Q8IYD9 372 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 ELMO1Q92556 727 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 SH3KBP1Q96B97 665 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 FAM129BQ96TA1 746 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 MND1Q9BWT6 205 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 TMEM38AQ9H6F2 299 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 RANGRFQ9HD47 186 aaPredicted RBP14.96□□□□□ -0.01
GPN1-212ENST00000616939 VPS29Q9UBQ0 182 aa14.96□□□□□ -0.01
GPN1-212ENST00000616939 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.95□□□□□ -0.02
GPN1-212ENST00000616939 MTMR11A4FU01 709 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 RNASET2O00584 256 aaKnown RBP14.95□□□□□ -0.02
GPN1-212ENST00000616939 RGS5O15539 181 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 ARHGEF9O43307 516 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 PRAMEF4O60810 478 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 TRBC1P01850 177 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 AP1S2P56377 157 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 GAB1Q13480 694 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 DOC2BQ14184 412 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 CHRNA6Q15825 494 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 ZXDCQ2QGD7 858 aaPredicted RBP14.95□□□□□ -0.02
GPN1-212ENST00000616939 ZMAT1Q5H9K5 638 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 CPTPQ5TA50 214 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 PRAMEF9Q5VWM5 478 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 SLC30A8Q8IWU4 369 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 BBS7Q8IWZ6 715 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 OR9Q1Q8NGQ5 310 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 WDR20Q8TBZ3 569 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 SUN5Q8TC36 379 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 KLHL6Q8WZ60 621 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 SLC25A46Q96AG3 418 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 ZFYVE19Q96K21 471 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 MED18Q9BUE0 208 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 ROGDIQ9GZN7 287 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 C11orf54Q9H0W9 315 aaPredicted RBP14.95□□□□□ -0.02
GPN1-212ENST00000616939 IRF2BPLQ9H1B7 796 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 BRF2Q9HAW0 419 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 EXOSC4Q9NPD3 245 aaKnown RBP14.95□□□□□ -0.02
GPN1-212ENST00000616939 ACER3Q9NUN7 267 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 ZDHHC3Q9NYG2 299 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 NUFIP1Q9UHK0 495 aaKnown RBP14.95□□□□□ -0.02
GPN1-212ENST00000616939 SSR3Q9UNL2 185 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 SATB2Q9UPW6 733 aa14.95□□□□□ -0.02
GPN1-212ENST00000616939 PROM1O43490 865 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 TPST2O60704 377 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 HCN1O60741 890 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ZNF780AO75290 641 aaPredicted RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 CSO75390 466 aaKnown RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 PDE9AO76083 593 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 IFNA14P01570 189 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 SRPRAP08240 638 aaKnown RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 CSF3P09919 207 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ALPIP09923 528 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 BPIP17213 487 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 M6PRP20645 277 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 GZMKP49863 264 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 MVDP53602 400 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 FAM189BP81408 668 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 FAPQ12884 760 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 TARDBPQ13148 414 aaKnown RBP eCLIP14.94□□□□□ -0.02
GPN1-212ENST00000616939 KCNC3Q14003 757 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 QPRTQ15274 297 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 PTCHD3Q3KNS1 767 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 SMUG1Q53HV7 270 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 CRB2Q5IJ48 1285 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 FRMPD2BQ6IN97 320 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms