RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 NEIL2Q969S2 332 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 FBXL8Q96CD0 374 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 TSNARE1Q96NA8 513 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 OR4K3Q96R72 315 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 PRDM9Q9NQV7 894 aa16.72■□□□□ 0.27
SMN2-213ENST00000614240 KLF13Q9Y2Y9 288 aaPredicted RBP16.72■□□□□ 0.27
SMN2-213ENST00000614240 GOLGA6L10A0A0M3HER8 536 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 PGRMC1O00264 195 aaKnown RBP16.71■□□□□ 0.27
SMN2-213ENST00000614240 NRDCO43847 1150 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 CDC40O60508 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMN2-213ENST00000614240 TPOP07202 933 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 CAPN3P20807 821 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 GABRB3P28472 473 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 PTGER1P34995 402 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 SCTRP47872 440 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 MEOX1P50221 254 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 RBBP5Q15291 538 aaKnown RBP16.71■□□□□ 0.27
SMN2-213ENST00000614240 CYP1B1Q16678 543 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 MEX3BQ6ZN04 569 aaKnown RBP16.71■□□□□ 0.27
SMN2-213ENST00000614240 KIAA0408Q6ZU52 694 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 TMEM156Q8N614 296 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 POGLUT1Q8NBL1 392 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 TRPV3Q8NET8 790 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 SPOCK3Q9BQ16 436 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 AIF1LQ9BQI0 150 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 CLK4Q9HAZ1 481 aaKnown RBP16.71■□□□□ 0.27
SMN2-213ENST00000614240 JRKLQ9Y4A0 524 aa16.71■□□□□ 0.27
SMN2-213ENST00000614240 BANF1O75531 89 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 ENO2P09104 434 aaPredicted RBP16.7■□□□□ 0.26
SMN2-213ENST00000614240 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
SMN2-213ENST00000614240 PTGS2P35354 604 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 RFC3P40938 356 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 TLE4Q04727 773 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 HYAL2Q12891 473 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 BBS9Q3SYG4 887 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 TOR1AIP1Q5JTV8 583 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 RNASEH2BQ5TBB1 312 aaKnown RBP16.7■□□□□ 0.26
SMN2-213ENST00000614240 HECTD2Q5U5R9 776 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 NAT9Q9BTE0 207 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 SPNS1Q9H2V7 528 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 TRIM45Q9H8W5 580 aaPredicted RBP16.7■□□□□ 0.26
SMN2-213ENST00000614240 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 ASIC3Q9UHC3 531 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 FBXW2Q9UKT8 454 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 VWA7Q9Y334 891 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 ASB1Q9Y576 335 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 OTOGQ6ZRI0 2925 aa16.7■□□□□ 0.26
SMN2-213ENST00000614240 TRBV11-1A0A0K0K1C0 115 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 A0A1B0GTH9 108 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 TCRBV16S1A1N1A0A5B0 115 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 USP27XA6NNY8 438 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 PEX1O43933 1283 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 FNTAP49354 379 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 CLCN2P51788 898 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 PGGT1BP53609 377 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 REEP5Q00765 189 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 TMPRSS11BQ86T26 416 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 THOC6Q86W42 341 aaKnown RBP16.69■□□□□ 0.26
SMN2-213ENST00000614240 ZNF227Q86WZ6 799 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 LRRC8AQ8IWT6 810 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 SULF2Q8IWU5 870 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 CHERPQ8IWX8 916 aaKnown RBP16.69■□□□□ 0.26
SMN2-213ENST00000614240 NFAM1Q8NET5 270 aaPredicted RBP16.69■□□□□ 0.26
SMN2-213ENST00000614240 FAM57AQ8TBR7 257 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 C14orf79Q96F83 325 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 CERS2Q96G23 380 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 FAR2Q96K12 515 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 DMRTA2Q96SC8 542 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 SLC6A16Q9GZN6 736 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 KLHL31Q9H511 634 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 PELI2Q9HAT8 420 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 PNO1Q9NRX1 252 aaKnown RBP16.69■□□□□ 0.26
SMN2-213ENST00000614240 ZFATQ9P243 1243 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 SLC17A6Q9P2U8 582 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 KCNE2Q9Y6J6 123 aa16.69■□□□□ 0.26
SMN2-213ENST00000614240 IGKV3D-11A0A0A0MRZ8 115 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 ADAM10O14672 748 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 FANCGO15287 622 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 MYO1DO94832 1006 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 SAT1P21673 171 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 KRTAP10-9P60411 292 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 BTN3A2P78410 334 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 TMEM211Q6ICI0 200 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 FAM45BPQ6NSW5 357 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 NXPE4Q6UWF7 544 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CEP128Q6ZU80 1094 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 FGD2Q7Z6J4 655 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CDH24Q86UP0 819 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CD163Q86VB7 1156 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CNTN4Q8IWV2 1026 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CYP4Z2PQ8N1L4 340 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 ANKRD53Q8N9V6 530 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 FAM45AQ8TCE6 357 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CFAP36Q96G28 342 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 EGFL8Q99944 293 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 CCDC77Q9BR77 488 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 PDZD2O15018 2839 aa16.68■□□□□ 0.26
SMN2-213ENST00000614240 NCOA6Q14686 2063 aaPredicted RBP16.68■□□□□ 0.26
SMN2-213ENST00000614240 POLQO75417 2590 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms