RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 VSX2P58304 361 aaPredicted RBP13.12□□□□□ -0.31
TMEM254-213ENST00000613758 STXBP1P61764 594 aaKnown RBP13.12□□□□□ -0.31
TMEM254-213ENST00000613758 RGS1Q08116 209 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 MAPRE2Q15555 327 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 PDCD4Q53EL6 469 aaKnown RBP13.12□□□□□ -0.31
TMEM254-213ENST00000613758 WASHC2DQ5SRD0 308 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
TMEM254-213ENST00000613758 TMPRSS9Q7Z410 1059 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 PRSS42Q7Z5A4 293 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 UBE3DQ7Z6J8 389 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 NAXDQ8IW45 347 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 CAMKVQ8NCB2 501 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 MS4A6EQ96DS6 147 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 SLC6A16Q9GZN6 736 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 SLC52A3Q9NQ40 469 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 SORBS2O94875 1100 aaKnown RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 ARL4DP49703 201 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 PLA2G16P53816 162 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 UFM1P61960 85 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 DEFB110Q30KQ9 67 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 REP15Q6BDI9 236 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 KCT2Q8NC54 265 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 DPYSL5Q9BPU6 564 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 MDC1Q14676 2089 aaKnown RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 RTCAO00442 366 aaKnown RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 DLL1O00548 723 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 P2RX6O15547 441 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 PCDH7O60245 1069 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 SLC22A3O75751 556 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 GBAP04062 536 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 KLK1P06870 262 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 SDC1P18827 310 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 TACR1P25103 407 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 BSGP35613 385 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 HSD11B2P80365 405 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 STX5Q13190 355 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 PTGR1Q14914 329 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 ZNF655Q8N720 491 aaPredicted RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 CSNK1A1LQ8N752 337 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 EFCAB3Q8N7B9 438 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 OR2L5Q8NG80 312 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 OR4D9Q8NGE8 314 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 KLHL6Q8WZ60 621 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 GFM1Q96RP9 751 aaKnown RBP13.11□□□□□ -0.31
TMEM254-213ENST00000613758 SLC25A23Q9BV35 468 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 ZIM2Q9NZV7 527 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 PLCL2Q9UPR0 1127 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 UNC13CQ8NB66 2214 aa13.11□□□□□ -0.31
TMEM254-213ENST00000613758 GNG14A0A1W2PPG7 69 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 C9JVG2 144 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ANKRD28O15084 1053 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ERI3O43414 337 aaKnown RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ENTPD5O75356 428 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 GP1BAP07359 652 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 PCSK2P16519 638 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 CAPN3P20807 821 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 GABRA4P48169 554 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 HKDC1Q2TB90 917 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 MANEAQ5SRI9 462 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ABHD17CQ6PCB6 329 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 C16orf89Q6UX73 402 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 PAGE2Q7Z2X7 111 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 DGLUCYQ7Z3D6 616 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 KMT5CQ86Y97 462 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 PGAM4Q8N0Y7 254 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 CLHC1Q8NHS4 586 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 PROKR1Q8TCW9 393 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 QRFPRQ96P65 431 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 TSSK3Q96PN8 268 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 C17orf62Q9BQA9 187 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ZNF717Q9BY31 904 aaPredicted RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 NLNQ9BYT8 704 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 MCM8Q9UJA3 840 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 CUL9Q8IWT3 2517 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 A0A0G2JN53 185 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 C4orf51C9J302 202 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 ZSCAN9O15535 394 aaPredicted RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 GDF9O60383 454 aa13.1□□□□□ -0.31
TMEM254-213ENST00000613758 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
TMEM254-213ENST00000613758 CBFA2T3O75081 653 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms