RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TMEM203Q969S6 136 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 TSSK6Q9BXA6 273 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 LRRN3Q9H3W5 708 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 CUEDC1Q9NWM3 386 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 SIRPGQ9P1W8 387 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 NFS1Q9Y697 457 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 H7C2Y5 167 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 M0R233 179 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 SCGB1D2O95969 90 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 SRCP12931 536 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 MAT2AP31153 395 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 ACTC1P68032 377 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 ACTA1P68133 377 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 FADDQ13158 208 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 HSD17B12Q53GQ0 312 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 PYCR2Q96C36 320 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 WACQ9BTA9 647 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 RANBP3Q9H6Z4 567 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 ACSL5Q9ULC5 683 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 SMCO3A2RU48 225 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 CSN2P05814 226 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 RPA4Q13156 261 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 MEP1AQ16819 746 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 GKN2Q86XP6 184 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 RHEBL1Q8TAI7 183 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 TRMT61BQ9BVS5 477 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 REEP4Q9H6H4 257 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 ENAMQ9NRM1 1142 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 NDRG2Q9UN36 371 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 NOP16Q9Y3C1 178 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 A0A1B0GVI7 797 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 TRIM64CA6NLI5 447 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 FAAHO00519 579 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 MS4A13Q5J8X5 152 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF565Q8N9K5 539 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 OR4K17Q8NGC6 315 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 SLC7A6OSQ96CW6 309 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 CENPMQ9NSP4 180 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 CAPN5O15484 640 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 HTRA2O43464 458 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 GABBR2O75899 941 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 LHCGRP22888 699 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 HACD2Q6Y1H2 254 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 RHBDF1Q96CC6 855 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 SLC2A4RGQ9NR83 387 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 RBPJLQ9UBG7 517 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 HCN2Q9UL51 889 aa16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 MAGED1Q9Y5V3 778 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-206ENST00000613459 A0A1W2PRU2 124 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 HTR3EA5X5Y0 456 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 ANXA3P12429 323 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 DNASE1L3Q13609 305 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 PTCHD3Q3KNS1 767 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 OR5P2Q8WZ92 322 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 CCDC86Q9H6F5 360 aaKnown RBP16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 INSL6Q9Y581 213 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 CTSOP43234 321 aaPredicted RBP16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 BDKRB1P46663 353 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 SLC3A1Q07837 685 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 PLEKHG7Q6ZR37 379 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 FBXL20Q96IG2 436 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 LRIG1Q96JA1 1093 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 SIGLEC10Q96LC7 697 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF285Q96NJ3 590 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 GRHPRQ9UBQ7 328 aa16.83■□□□□ 0.29
HMGXB3-206ENST00000613459 J3KR12 359 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 XPNPEP2O43895 674 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 PLGP00747 810 aaPredicted RBP16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 HAGHLQ6PII5 290 aaPredicted RBP16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 OR5AK3PQ8NH89 298 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 LPIN3Q9BQK8 851 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 OR2B2Q9GZK3 357 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 C10orf71Q711Q0 1435 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 HTR1EP28566 365 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 SHMT2P34897 504 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 CYS1Q717R9 158 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 PM20D2Q8IYS1 436 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 PHOX2BQ99453 314 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF700Q9H0M5 742 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 CTPS2Q9NRF8 586 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 J3QLW9 94 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 FLRT2O43155 660 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF19P17023 458 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 SLC6A9P48067 706 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 SLC9A3P48764 834 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 GARNL3Q5VVW2 1013 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 SHQ1Q6PI26 577 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 ADAMTS10Q9H324 1103 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 TAS2R10Q9NYW0 307 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 SLC17A6Q9P2U8 582 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 PRODH2Q9UF12 536 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 HSPB11Q9Y547 144 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 HSPE1-MOB4S4R3N1 261 aa16.83■□□□□ 0.28
HMGXB3-206ENST00000613459 AXIN1O15169 862 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 OPN1SWP03999 348 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 PFKMP08237 780 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 ARSFP54793 590 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 SHKBP1Q8TBC3 707 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms