RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 ZW10O43264 779 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 SLC28A2O43868 658 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 ATG13O75143 517 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 CBSLP0DN79 551 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 ALPPL2P10696 532 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 CNR2P34972 360 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 CBSP35520 551 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 SOX3P41225 446 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 SPINT3P49223 89 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 OLR1P78380 273 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 MRPL58Q14197 206 aaKnown RBP13.27□□□□□ -0.28
HPS1-215ENST00000613394 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.28
HPS1-215ENST00000613394 ARTNQ5T4W7 220 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 TMPRSS11AQ6ZMR5 421 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 TRIM48Q8IWZ4 208 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 CELF2-AS1Q8N7Q2 184 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 IGSF21Q96ID5 467 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 YME1L1Q96TA2 773 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 TMEM45AQ9NWC5 275 aa13.27□□□□□ -0.28
HPS1-215ENST00000613394 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.28
HPS1-215ENST00000613394 TSC22D2O75157 780 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 SLC10A3P09131 477 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 HLA-EP13747 358 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 SLC19A1P41440 591 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 SLC16A1P53985 500 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 HBA1P69905 142 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 PTSQ03393 145 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 TARDBPQ13148 414 aaKnown RBP eCLIP13.27□□□□□ -0.29
HPS1-215ENST00000613394 GBX1Q14549 363 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 PYDC2Q56P42 97 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 GDPD4Q6W3E5 623 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 TMEM25Q86YD3 366 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 CELF5Q8N6W0 485 aaKnown RBP13.27□□□□□ -0.29
HPS1-215ENST00000613394 TRNT1Q96Q11 434 aaKnown RBP13.27□□□□□ -0.29
HPS1-215ENST00000613394 ZDHHC4Q9NPG8 344 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 SEMA3GQ9NS98 782 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 ZNF221Q9UK13 617 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 POFUT2Q9Y2G5 429 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 INSL5Q9Y5Q6 135 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 OTOFQ9HC10 1997 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 AGAP5A6NIR3 686 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 CENPXA8MT69 81 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 SCAMP2O15127 329 aaKnown RBP13.27□□□□□ -0.29
HPS1-215ENST00000613394 PSMA1P25786 263 aaKnown RBP13.27□□□□□ -0.29
HPS1-215ENST00000613394 GSTM5P46439 218 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 KRR1Q13601 381 aaKnown RBP13.27□□□□□ -0.29
HPS1-215ENST00000613394 SF3B4Q15427 424 aaKnown RBP eCLIP13.27□□□□□ -0.293e-7■■■■□ 25.9
HPS1-215ENST00000613394 CEACAM20Q6UY09 585 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 CHPFQ8IZ52 775 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 PARP16Q8N5Y8 322 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 TCEANCQ8N8B7 351 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 B3GNT7Q8NFL0 401 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 DIRAS2Q96HU8 199 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 ZNF236Q9UL36 1845 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 PCDHGA6Q9Y5G7 932 aa13.27□□□□□ -0.29
HPS1-215ENST00000613394 TTC34A8MYJ7 566 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 SGTAO43765 313 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 SOCS5O75159 536 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ETHE1O95571 254 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 NR2F1P10589 423 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 BUD31P41223 144 aaPredicted RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 GPR1P46091 355 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 CRISP3P54108 245 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ITGA1P56199 1179 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 TUBA1BP68363 451 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ZFP69Q49AA0 526 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 LRIF1Q5T3J3 769 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 TUBA1AQ71U36 451 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 BCDIN3DQ7Z5W3 292 aaKnown RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 PTOV1Q86YD1 416 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 NEIL2Q969S2 332 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 TESCQ96BS2 214 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ART5Q96L15 291 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 SEC14L3Q9UDX4 400 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 TRIM64A6NGJ6 449 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 LEFTY1O75610 366 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 IRF5Q13568 498 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ZC3H12BQ5HYM0 836 aaKnown RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 UBE2UQ5VVX9 321 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 LIPKQ5VXJ0 399 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 TTLL2Q9BWV7 592 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 ASPNQ9BXN1 380 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 GIMAP4Q9NUV9 329 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 NDRG4Q9ULP0 352 aaKnown RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 WWP2O00308 870 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 GAPDHSO14556 408 aaPredicted RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 FZD6O60353 706 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 WBP4O75554 376 aaKnown RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 CBX2Q14781 532 aaPredicted RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.26□□□□□ -0.29
HPS1-215ENST00000613394 USP30Q70CQ3 517 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 IQCF1Q8N6M8 205 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 MINDY2Q8NBR6 621 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
HPS1-215ENST00000613394 REPS1Q96D71 796 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms