RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ARMC2Q8NEN0 867 aa16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 GIMAP7Q8NHV1 300 aa16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 ALKBH8Q96BT7 664 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 CCDC68Q9H2F9 335 aa16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 EIF2B3Q9NR50 452 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 SYBUQ9NX95 663 aa16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 KCMF1Q9P0J7 381 aa16.04■□□□□ 0.16
CSNK1E-215ENST00000612795 A0A0G2JNJ9 132 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 OR14I1A6ND48 311 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 BTNL10A8MVZ5 291 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 GFYI3L273 518 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 AP3B1O00203 1094 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 PSMD12O00232 456 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 SLC16A5O15375 505 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 FTCDO95954 541 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 SERPIND1P05546 499 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 GLI4P10075 376 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 CDH1P12830 882 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 ALOX12P18054 663 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 MGAT1P26572 445 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 ADSLP30566 484 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 SSR4P51571 173 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 BTG2P78543 158 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 BASP1P80723 227 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 HYAL2Q12891 473 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 SLC25A35Q3KQZ1 300 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 SLC22A16Q86VW1 577 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 CDC20BQ86Y33 519 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 SYCE1Q8N0S2 351 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 AFAP1L2Q8N4X5 818 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 NFAM1Q8NET5 270 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 FRMD8P1Q9BZ68 369 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 Q9UFV3 132 aa16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 NSD1Q96L73 2696 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 HRNRQ86YZ3 2850 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-215ENST00000612795 TCRBV16S1A1N1A0A5B0 115 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 A8MVJ9 347 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 CEP104O60308 925 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 MYO1DO94832 1006 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 B3GALT4O96024 378 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 PAMP19021 973 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 PEX19P40855 299 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 RGS1Q08116 209 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 SNX1Q13596 522 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 SKOR2Q2VWA4 1001 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 SEL1L2Q5TEA6 688 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 FBXW10Q5XX13 1052 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 KIAA0930Q6ICG6 404 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 PAMR1Q6UXH9 720 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 RGS9BPQ6ZS82 235 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 CENPUQ71F23 418 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 ABHD13Q7L211 337 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 CILP2Q8IUL8 1156 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 B3GNT7Q8NFL0 401 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 OR2M7Q8NG81 312 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 C1orf54Q8WWF1 131 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 MBD6Q96DN6 1003 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 SMR3AQ99954 134 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 CCDC77Q9BR77 488 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 KIFC1Q9BW19 673 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 TTTY12Q9BZ98 90 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 LACRTQ9GZZ8 138 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 ATG10Q9H0Y0 220 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 ZDHHC11Q9H8X9 412 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 PRDM9Q9NQV7 894 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 DEPPQ9NTK1 212 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 INTS10Q9NVR2 710 aaKnown RBP16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 HPF1Q9NWY4 346 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 CRIM1Q9NZV1 1036 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 FAM215AQ9Y5M1 114 aa16.02■□□□□ 0.16
CSNK1E-215ENST00000612795 MPDZO75970 2070 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 CTAGE9A4FU28 777 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 PINLYPA6NC86 204 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 A6NNC1 897 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 OR1F1O43749 312 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 DNAJB6O75190 326 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 ZSCAN5DPP0CG00 497 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 ZNF888P0CJ79 500 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 CCND1P24385 295 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 UQCRC1P31930 480 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 PWP1Q13610 501 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 ZNF470Q6ECI4 717 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 PIWIL4Q7Z3Z4 852 aaKnown RBP16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 LIX1LQ8IVB5 337 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 SPNS2Q8IVW8 549 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 CPNE9Q8IYJ1 553 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 TBC1D19Q8N5T2 526 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 APCDD1LQ8NCL9 501 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 WFDC11Q8NEX6 87 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 ASB15Q8WXK1 588 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 KCNJ9Q92806 393 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 VMP1Q96GC9 406 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 C18orf12Q96KH6 178 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 RHBGQ9H310 441 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 DMRT3Q9NQL9 472 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 KLHL42Q9P2K6 505 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 SOX13Q9UN79 622 aa16.01■□□□□ 0.15
CSNK1E-215ENST00000612795 YARS2Q9Y2Z4 477 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms