RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 OR4K3Q96R72 315 aa14.12□□□□□ -0.15
CDH1-213ENST00000612417 DPH2Q9BQC3 489 aaPredicted RBP14.12□□□□□ -0.15
CDH1-213ENST00000612417 KRT84Q9NSB2 600 aa14.12□□□□□ -0.15
CDH1-213ENST00000612417 ERVK-18Q9QC07 812 aa14.12□□□□□ -0.15
CDH1-213ENST00000612417 ERGIC3Q9Y282 383 aa14.12□□□□□ -0.15
CDH1-213ENST00000612417 BTBD3Q9Y2F9 522 aa14.12□□□□□ -0.15
CDH1-213ENST00000612417 TRIOBPQ9H2D6 2365 aa14.12□□□□□ -0.15
CDH1-213ENST00000612417 TMEM202A6NGA9 273 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 GABRR3A8MPY1 467 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 FADS2P1A8MWK0 482 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 J3QRK9 145 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 LZTS3O60299 673 aaPredicted RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 CPSF4O95639 269 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 C9P02748 559 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 CATP04040 527 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 HNRNPCP07910 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDH1-213ENST00000612417 CYP4B1P13584 511 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 PCGF2P35227 344 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 TIE1P35590 1138 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 PRLHRP49683 370 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 CRYBA2P53672 197 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 NAE1Q13564 534 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 NR1D2Q14995 579 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 NPTX1Q15818 432 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 PROX2Q3B8N5 592 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 ZNF648Q5T619 568 aaPredicted RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 CPTPQ5TA50 214 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 ANXA8L1Q5VT79 327 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 ERN2Q76MJ5 926 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 GALNT10Q86SR1 603 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 SVOPQ8N4V2 548 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 VPS37AQ8NEZ2 397 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 ZFP90Q8TF47 636 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 CHTF18Q8WVB6 975 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 BTN2A2Q8WVV5 523 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 TMEM159Q96B96 161 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 SH3KBP1Q96B97 665 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 CXorf40BQ96DE9 158 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 SIGLEC11Q96RL6 698 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 TTYH1Q9H313 450 aaPredicted RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 THUMPD1Q9NXG2 353 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 CD207Q9UJ71 328 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 PADI2Q9Y2J8 665 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 SLC5A10A0PJK1 596 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 OR2AG2A6NM03 316 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 NPC1O15118 1278 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 MMP20O60882 483 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 DIRAS1O95057 198 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 FKBP9O95302 570 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 ETHE1O95571 254 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 NAT1P18440 290 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 IMPA1P29218 277 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 OPRL1P41146 370 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 RXRGP48443 463 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 PNLIPRP1P54315 467 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 KCNJ10P78508 379 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 SYTL3Q4VX76 610 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 FAM46CQ5VWP2 391 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 RAVER1Q8IY67 606 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 NRSN1Q8IZ57 195 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 CENPSQ8N2Z9 138 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 C1orf52Q8N6N3 182 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 SH3YL1Q96HL8 342 aaPredicted RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 GABARAPL3Q9BY60 117 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 SGK2Q9HBY8 427 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 KIF17Q9P2E2 1029 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 FZD4Q9ULV1 537 aa14.11□□□□□ -0.15
CDH1-213ENST00000612417 TDRKHQ9Y2W6 561 aaKnown RBP14.11□□□□□ -0.15
CDH1-213ENST00000612417 CLDN25C9JDP6 229 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 PSMD11O00231 422 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 RNASET2O00584 256 aaKnown RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 SPINT1O43278 529 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TSPAN6O43657 245 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 ATG13O75143 517 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 OCM2P0CE71 109 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 OCMP0CE72 109 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 EFNA1P20827 205 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 IDSP22304 550 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 HPCAL1P37235 193 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 MASP1P48740 699 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CSNK2BP67870 215 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CNTN1Q12860 1018 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 NPRL3Q12980 569 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 DDX39BQ13838 428 aaKnown RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 RGNQ15493 299 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TEAD4Q15561 434 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 PRSS48Q7RTY5 328 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 IGFN1Q86VF2 1251 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 OR7G3Q8NG95 312 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 SNRNP27Q8WVK2 155 aaKnown RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 IPCEF1Q8WWN9 437 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 DTD2Q96FN9 168 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 ZNF300Q96RE9 604 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 AKIP1Q9NQ31 210 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 ADPRHL2Q9NX46 363 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 SIRT5Q9NXA8 310 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 ZNF282Q9UDV7 671 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 ITGB1BP2Q9UKP3 347 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TMEM98Q9Y2Y6 226 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 DGKBQ9Y6T7 804 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms