RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 OLIG3Q7RTU3 272 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 C11orf74Q86VG3 221 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 STX19Q8N4C7 294 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SVOPQ8N4V2 548 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ATL1Q8WXF7 558 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF300Q96RE9 604 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 CHCHD6Q9BRQ6 235 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZSCAN5AQ9BUG6 496 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ABCG4Q9H172 646 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 GULP1Q9UBP9 304 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 DUSP12Q9UNI6 340 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 PCDHGB3Q9Y5G1 929 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 TMEM229AB2RXF0 380 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SEMG1P04279 462 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SERPIND1P05546 499 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 CTSAP10619 480 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SELENOWP63302 87 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SFTPA1Q8IWL2 248 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 CHTF18Q8WVB6 975 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 RAB8BQ92930 207 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 OR51E2Q9H255 320 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 AKIP1Q9NQ31 210 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 KLHL42Q9P2K6 505 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 OBSL1O75147 1896 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 PRAMEF33A0A0G2JMD5 474 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 H0YIV9 168 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 EIF3FO00303 357 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 KPNA4O00629 521 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 NPC1O15118 1278 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SCAMP1O15126 338 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZSCAN9O15535 394 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 PRAMEF10O60809 474 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 FKTNO75072 461 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SOX14O95416 240 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 C1orf105O95561 183 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 RHOP08100 348 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 IL3P08700 152 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 NPPBP16860 134 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF30P17039 623 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 JUNDP17535 347 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 IL1RNP18510 177 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 GRK5P34947 590 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ASMTP46597 345 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 TCEA2Q15560 299 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 TIGD6Q17RP2 521 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 GCNT6Q5T4J0 391 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SYT6Q5T7P8 510 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZDHHC20Q5W0Z9 365 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 SLC22A16Q86VW1 577 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 VANGL1Q8TAA9 524 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-213ENST00000607923 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF566Q969W8 418 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 HHIPQ96QV1 700 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 IL4I1Q96RQ9 567 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 ZBP1Q9H171 429 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 RERGLQ9H628 205 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 MIEF1Q9NQG6 463 aa13.2□□□□□ -0.3
CTCFL-213ENST00000607923 PIPSLA2A3N6 862 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 TBX1O43435 398 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 LZTS3O60299 673 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-213ENST00000607923 TPST2O60704 377 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ADH1AP07327 375 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 IGFBP1P08833 259 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-213ENST00000607923 CCL5P13501 91 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 CTSKP43235 329 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 GPR1P46091 355 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 SERPINB10P48595 397 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF763Q0D2J5 394 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 NUMA1Q14980 2115 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ANXA8L1Q5VT79 327 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 KLHL17Q6TDP4 642 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 CCDC149Q6ZUS6 474 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-213ENST00000607923 C12orf40Q86WS4 652 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 FBLIM1Q8WUP2 373 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 GGHQ92820 318 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 REEP4Q9H6H4 257 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 PCYT1BQ9Y5K3 369 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ATG2BQ96BY7 2078 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 SLC5A10A0PJK1 596 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 OR2A25A4D2G3 310 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
CTCFL-213ENST00000607923 VEZF1Q14119 521 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 MED22Q15528 200 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 IFI44LQ53G44 452 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF805Q5CZA5 627 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 NIPAL1Q6NVV3 410 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms