RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF227Q86WZ6 799 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 NIM1KQ8IY84 436 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZZZ3Q8IYH5 903 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR8H2Q8N162 312 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP4Z2PQ8N1L4 340 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLDN22Q8N7P3 220 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DTX3Q8N9I9 347 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 UXS1Q8NBZ7 420 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CAMKVQ8NCB2 501 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PLA2G15Q8NCC3 412 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GLB1L3Q8NCI6 653 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF540Q8NDQ6 660 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DENND6BQ8NEG7 585 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR8H1Q8NGG4 311 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TEX47Q8TBZ9 253 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 NSUN6Q8TEA1 469 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCTD4Q8WVF5 259 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATOH1Q92858 354 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 SGK3Q96BR1 496 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PTERQ96BW5 349 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 NXPE2Q96DL1 559 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 FOPNLQ96NB1 174 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF583Q96ND8 569 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 QRFPRQ96P65 431 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 BBS4Q96RK4 519 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACOX2Q99424 681 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 VAT1Q99536 393 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCNJ15Q99712 375 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DPYSL5Q9BPU6 564 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ADPGKQ9BRR6 497 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM213AQ9BRX8 229 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF416Q9BWM5 594 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDCA4Q9BXL8 241 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 NUSAP1Q9BXS6 441 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PIGUQ9H490 435 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ASB7Q9H672 318 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GBA2Q9HCG7 927 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 FANCFQ9NPI8 374 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ENTPD7Q9NQZ7 604 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRMT13Q9NUP7 481 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DCAF13Q9NV06 445 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 IMP3Q9NV31 184 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 AIG1Q9NVV5 245 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RBFOX1Q9NWB1 397 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PPP1R14DQ9NXH3 145 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 COA4Q9NYJ1 87 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRPM5Q9NZQ8 1165 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYTH4Q9UIA0 394 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 FBXL7Q9UJT9 491 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 AGO1Q9UL18 857 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC39A10Q9ULF5 831 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 KLHL20Q9Y2M5 609 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 MFHAS1Q9Y4C4 1052 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 HES2Q9Y543 173 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 HSPB11Q9Y547 144 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GMPPBQ9Y5P6 360 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 V9GYH0 126 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF638Q14966 1978 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 COL1A2P08123 1366 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A0A6YYJ9 748 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A0B4J293 547 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A1B0GVI7 797 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A1W2PQ09 198 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 C7orf66A4D0T2 115 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ASPDHA6ND91 283 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MFSD2BA6NFX1 497 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLCA1A8K7I4 914 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 A8MT66 165 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 E5RI56 91 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SGK494L7N484 410 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 NR5A2O00482 541 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 UBFD1O14562 309 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TSPAN4O14817 238 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 AZIN1O14977 448 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 OGTO15294 1046 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RGS5O15539 181 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC7A4O43246 635 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ORC5O43913 435 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SSX4O60224 188 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 HS6ST1O60243 411 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACSL4O60488 711 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 HUS1O60921 280 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM20BO75063 409 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PMPCBO75439 489 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ERN1O75460 977 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PSIP1O75475 530 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC22A3O75751 556 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CNOT4O95628 575 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 LALBAP00709 142 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 IL1AP01583 271 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 C9P02748 559 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 LCKP06239 509 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CSF3P09919 207 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 LTA4HP09960 611 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR56A5P0C7T3 313 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP2B6P20813 491 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAGP20916 626 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 KLRK1P26718 216 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 DNAJA1P31689 397 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RORAP35398 523 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms