RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 MT-ND2P03891 347 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 KRT6BP04259 564 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 CT45A8P0DMV1 189 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 CT45A9P0DMV2 189 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 B4GALT1P15291 398 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 FCARP24071 287 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 PKLRP30613 574 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 OR1D2P34982 312 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 TNFRSF4P43489 277 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 KRT6CP48668 564 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 ART1P52961 327 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 KCNK10P57789 538 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 OR1D5P58170 312 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 LINC00205P59089 165 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 GPR17Q13304 367 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 GPR50Q13585 617 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 ITGA9Q13797 1035 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 TRIM29Q14134 588 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 CT45A2Q5DJT8 189 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 TECRLQ5HYJ1 363 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 LCN1P1Q5VSP4 162 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 NKAIN2Q5VXU1 208 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 C9orf57Q5W0N0 161 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 AFTPHQ6ULP2 937 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 C15orf52Q6ZUT6 534 aaKnown RBP3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 SLC24A5Q71RS6 500 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 PPP1R42Q7Z4L9 355 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 C5orf24Q7Z6I8 188 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 NFE4Q86UQ8 179 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 LCA5Q86VQ0 697 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 AMZ2Q86W34 360 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 ZC3H3Q8IXZ2 948 aaKnown RBP3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 GPC2Q8N158 579 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 NAGSQ8N159 534 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 FAM89BQ8N5H3 189 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 MINDY2Q8NBR6 621 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 SLC37A3Q8NCC5 494 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 GMCL1P1Q8NEA9 526 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 FAM71CQ8NEG0 241 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 DENND6BQ8NEG7 585 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 IGSF21Q96ID5 467 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 LMLNQ96KR4 655 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 UBAC1Q9BSL1 405 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 FAM49AQ9H0Q0 323 aaPredicted RBP3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 THAP2Q9H0W7 228 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 GANQ9H2C0 597 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 TMPRSS5Q9H3S3 457 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 EGLN3Q9H6Z9 239 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 COQ10BQ9H8M1 238 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 UPF2Q9HAU5 1272 aaKnown RBP3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 CNOT2Q9NZN8 540 aaKnown RBP3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 CLIP2Q9UDT6 1046 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 ENTPD4Q9Y227 616 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 COLEC10Q9Y6Z7 277 aa3.73□□□□□ -1.81
AC004542.1-201ENST00000602955 A0A087WZY1 265 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 IGHV4-61A0A0C4DH41 118 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 A8MVM7 634 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 ZNF732B4DXR9 585 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 OGTO15294 1046 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CLDN3O15551 220 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CPNE6O95741 557 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 AK1P00568 194 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 IGHV4-59P01825 116 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 NGFRP08138 427 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 GSTA2P09210 222 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 SLC1A3P43003 542 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 NUMBP49757 651 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CCL11P51671 97 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CCR4P51679 360 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 TRA2BP62995 288 aaKnown RBP3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 MRPS21P82921 87 aaKnown RBP3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 PDZK1IP1Q13113 114 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 SRSF9Q13242 221 aaKnown RBP eCLIP3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CEACAM7Q14002 265 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 GRB14Q14449 540 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 PDIA5Q14554 519 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 P2RY6Q15077 328 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 SPHARQ15513 63 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 PLPP4Q5VZY2 271 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 SNRNP48Q6IEG0 339 aaKnown RBP3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 OR4C11Q6IEV9 310 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CEACAM20Q6UY09 585 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CDHR3Q6ZTQ4 885 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 FOXL2NBQ6ZUU3 175 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 FCRLAQ7L513 359 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 ADGRD2Q7Z7M1 963 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 PIGZQ86VD9 579 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 TBC1D21Q8IYX1 336 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 KIRREL3Q8IZU9 778 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 ZNF843Q8N446 348 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 GANCQ8TET4 914 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 NXPE2Q96DL1 559 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 BPIFA2Q96DR5 249 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 RBM18Q96H35 190 aaKnown RBP3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 NECTIN4Q96NY8 510 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 S1PR3Q99500 378 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 LPAR4Q99677 370 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 SSX3Q99909 188 aa3.72□□□□□ -1.81
AC004542.1-201ENST00000602955 CCM2Q9BSQ5 444 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms