RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SEMA6CQ9H3T2 930 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 KLHL31Q9H511 634 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 SERHLQ9NQF3 203 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 ATAD3AQ9NVI7 634 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 PRSS51A0A1B0GVH4 220 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 MAP3K7O43318 606 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 GPR37L1O60883 481 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 SCN2BO60939 215 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 FURINP09958 794 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 LAMP1P11279 417 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 PIM1P11309 404 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 HSD17B1P14061 328 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 PLA2G16P53816 162 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 EEFSECP57772 596 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 TGM3Q08188 693 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 LRRC74AQ0VAA2 488 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 PDE7AQ13946 482 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 SHBQ15464 509 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 DUOXA1Q1HG43 343 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 PEAR1Q5VY43 1037 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 VN1R4Q7Z5H5 301 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 OR8J3Q8NGG0 315 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 TM4SF18Q96CE8 201 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ASB9Q96DX5 294 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 KCNC2Q96PR1 638 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 SH3GL1Q99961 368 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ZFYVE21Q9BQ24 234 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 TBCDQ9BTW9 1192 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 BHLHE41Q9C0J9 482 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 PAIP1Q9H074 479 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 DCLRE1BQ9H816 532 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 EVA1BQ9NVM1 165 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 SH3BP4Q9P0V3 963 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 BTBD3Q9Y2F9 522 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 AP3M1Q9Y2T2 418 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 RHPN2P1A8MT19 583 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ACOT8O14734 319 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 CTSVO60911 334 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 SMNDC1O75940 238 aaKnown RBP eCLIP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 TCN1P20061 433 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 HOXD12P35452 270 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 SSR2P43308 183 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 TSFMP43897 325 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 EPHA4P54764 986 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 MS4A2Q01362 244 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 CCNIQ14094 377 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ZNF528Q3MIS6 628 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 RABL3Q5HYI8 236 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 TRIM40Q6P9F5 258 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ABHD17CQ6PCB6 329 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ZNF438Q7Z4V0 828 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 MACROD1Q9BQ69 325 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 C17orf62Q9BQA9 187 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 ZSCAN32Q9NX65 697 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 VAPAQ9P0L0 249 aa16.82■□□□□ 0.28
SHKBP1-224ENST00000600718 A0A0J9YVX5 310 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 RFXANKO14593 260 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 ERI3O43414 337 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 DFNA5O60443 496 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 BCAS2O75934 225 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 IL3P08700 152 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 PVRP15151 417 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 MSX2P35548 267 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 CAPZBP47756 277 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 KLC1Q07866 573 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 FLOT2Q14254 428 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 HEPACAMQ14CZ8 416 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 RUNDC3AQ59EK9 446 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 ANKRD26P1Q6NSI1 321 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 ARL10Q8N8L6 244 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 CAMKVQ8NCB2 501 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 FAM156AQ8NDB6 213 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 PPCDCQ96CD2 204 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 FCRL4Q96PJ5 515 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 GBP5Q96PP8 586 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 INPP5KQ9BT40 448 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 SYNPO2LQ9H987 977 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 RNPEPL1Q9HAU8 725 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 PRDM7Q9NQW5 492 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 BTNL2Q9UIR0 455 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 HEATR5BQ9P2D3 2071 aa16.81■□□□□ 0.28
SHKBP1-224ENST00000600718 TRBV5-3A0A0A0MS03 114 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 A0A0A6YYD5 115 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 DNAJA2O60884 412 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 FKBP6O75344 327 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 PSMG1O95456 288 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 STATHP02808 62 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 SLC35G6P0C7Q6 338 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 GIMD1P0DJR0 217 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 DDX5P17844 614 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 PPP1CAP62136 330 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 MC1RQ01726 317 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 C11orf91Q3C1V1 193 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 AAGABQ6PD74 315 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 RNF44Q7L0R7 432 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 BMP8AQ7Z5Y6 402 aa16.8■□□□□ 0.28
SHKBP1-224ENST00000600718 RABEPKQ7Z6M1 372 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms