RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ADNP2	Q6IQ32	1131 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	RHBDD2	Q6NTF9	364 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	TRIM46	Q7Z4K8	759 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	ZCCHC14	Q8WYQ9	949 aa	Known RBP	20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	C19orf60	Q96EN9	201 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	C10orf90	Q96M02	699 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	SERPINI1	Q99574	410 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	CENPK	Q9BS16	269 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	NDC1	Q9BTX1	674 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	FAM107B	Q9H098	131 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	TUBB1	Q9H4B7	451 aa		20.88	■□□□□ 0.93
LTBP4-227	ENST00000600026	ATRX	P46100	2492 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	HYKK	A2RU49	373 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	MED26	O95402	600 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	SERPINA6	P08185	405 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	ALOX15	P16050	662 aa	Predicted RBP	20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	DRD4	P21917	467 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	RORA	P35398	523 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	ARSF	P54793	590 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	AQP5	P55064	265 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	STXBP1	P61764	594 aa	Known RBP	20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	MANEA	Q5SRI9	462 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	C6orf15	Q6UXA7	325 aa	Predicted RBP	20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	CHSY3	Q70JA7	882 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	VN1R5	Q7Z5H4	357 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	DTX1	Q86Y01	620 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	NLGN4X	Q8N0W4	816 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	NT5C	Q8TCD5	201 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	CREB3L4	Q8TEY5	395 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	THOC1	Q96FV9	657 aa	Known RBP	20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	LRFN5	Q96NI6	719 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	HBEGF	Q99075	208 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	MACROD1	Q9BQ69	325 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	MS4A8	Q9BY19	250 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	MEAF6	Q9HAF1	191 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	CUTC	Q9NTM9	273 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	TXLNG	Q9NUQ3	528 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	DHCR7	Q9UBM7	475 aa	Known RBP	20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	SLC12A4	Q9UP95	1085 aa		20.87	■□□□□ 0.93
LTBP4-227	ENST00000600026	CEP295	Q9C0D2	2601 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	URAD	A6NGE7	173 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	VPS4B	O75351	444 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	TGFB1	P01137	390 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	FAM214A	Q32MH5	1076 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	TTLL10	Q6ZVT0	673 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	DSEL	Q8IZU8	1212 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	RNF175	Q8N4F7	328 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	ARHGEF39	Q8N4T4	335 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	ZNF248	Q8NDW4	579 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	PPP1R36	Q96LQ0	422 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	KLHL14	Q9P2G3	628 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	VPS29	Q9UBQ0	182 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	DCTN4	Q9UJW0	460 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	PTGDR2	Q9Y5Y4	395 aa		20.86	■□□□□ 0.93
LTBP4-227	ENST00000600026	ASPM	Q8IZT6	3477 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	TMEM8B	A6NDV4	472 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	DSCR3	O14972	297 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	DIAPH2	O60879	1101 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	JUN	P05412	331 aa	Known RBP	20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	EMP3	P54852	163 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	TGM3	Q08188	693 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	CUL3	Q13618	768 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	NR6A1	Q15406	480 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	TGIF1	Q15583	401 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	MUM1	Q2TAK8	710 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	TMEM35A	Q53FP2	167 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	XKR7	Q5GH72	579 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	TOR1AIP1	Q5JTV8	583 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	SPDYA	Q5MJ70	313 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	DEPDC1	Q5TB30	811 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	C1orf189	Q5VU69	101 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	GARNL3	Q5VVW2	1013 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	KHDRBS2	Q5VWX1	349 aa	Known RBP	20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	ZNF385C	Q66K41	422 aa	Predicted RBP	20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	CGB2	Q6NT52	195 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	EPGN	Q6UW88	154 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	CACNA2D3	Q8IZS8	1091 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	DTWD1	Q8N5C7	304 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	ESX1	Q8N693	406 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	KCT2	Q8NC54	265 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	PROKR1	Q8TCW9	393 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	KCNE4	Q8WWG9	221 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	NKD1	Q969G9	470 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	TUBGCP3	Q96CW5	907 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	NAF1	Q96HR8	494 aa	Known RBP	20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	GBP5	Q96PP8	586 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	ACPT	Q9BZG2	426 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	OR51B5	Q9H339	312 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	LHX9	Q9NQ69	397 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	AHSP	Q9NZD4	102 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	NDOR1	Q9UHB4	597 aa		20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026	MRPS2	Q9Y399	296 aa	Known RBP	20.85	■□□□□ 0.93
LTBP4-227	ENST00000600026		A0A0G2JND7	137 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	MEN1	O00255	615 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	ZNF195	O14628	629 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	SH3BGRL	O75368	114 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	RSL1D1	O76021	490 aa	Known RBP	20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	RAP1GDS1	P52306	607 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	SNRPN	P63162	240 aa	Known RBP	20.84	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms