RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 PRF1P14222 555 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 TRHRP34981 398 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-210ENST00000599097 HLCSP50747 726 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 CDKL1Q00532 357 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 REEP5Q00765 189 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 FRG1Q14331 258 aaKnown RBP16.37■□□□□ 0.21
HOMER3-210ENST00000599097 FRA10AC1Q70Z53 315 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 ADAMTSL2Q86TH1 951 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 AGGF1Q8N302 714 aaeCLIP16.37■□□□□ 0.21
HOMER3-210ENST00000599097 OR5T3Q8NGG3 340 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 NEIL2Q969S2 332 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 MTFMTQ96DP5 389 aaKnown RBP16.37■□□□□ 0.21
HOMER3-210ENST00000599097 EGFL8Q99944 293 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 VKORC1Q9BQB6 163 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 CCDC77Q9BR77 488 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 CAPS2Q9BXY5 557 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 PITHD1Q9GZP4 211 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-210ENST00000599097 TRIM45Q9H8W5 580 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-210ENST00000599097 COQ3Q9NZJ6 369 aa16.37■□□□□ 0.21
HOMER3-210ENST00000599097 TCRBV16S1A1N1A0A5B0 115 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 CLDN4O14493 209 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 TFECO14948 347 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 H2AFYO75367 372 aaKnown RBP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 TCP1P17987 556 aaKnown RBP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 GNAZP19086 355 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 CLCN2P51788 898 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 TIAL1Q01085 375 aaKnown RBP eCLIP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 TMPRSS11BQ86T26 416 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 C7orf57Q8NEG2 295 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 UTP15Q8TED0 518 aaKnown RBP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 NPLQ9BXD5 320 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-210ENST00000599097 SLC6A16Q9GZN6 736 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 SCN3AQ9NY46 2000 aa16.36■□□□□ 0.21
HOMER3-210ENST00000599097 OR2W5A6NFC9 320 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 ZNF37AP17032 561 aaPredicted RBP16.35■□□□□ 0.21
HOMER3-210ENST00000599097 CAPN3P20807 821 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 GABRB3P28472 473 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 GRNP28799 593 aaKnown RBP16.35■□□□□ 0.21
HOMER3-210ENST00000599097 TPP2P29144 1249 aaPredicted RBP16.35■□□□□ 0.21
HOMER3-210ENST00000599097 ARL4CP56559 192 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 MLF1P58340 268 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 SNRPNP63162 240 aaKnown RBP16.35■□□□□ 0.21
HOMER3-210ENST00000599097 RBBP5Q15291 538 aaKnown RBP16.35■□□□□ 0.21
HOMER3-210ENST00000599097 CATSPEREQ5SY80 951 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 TEDDM1Q5T9Z0 273 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 NXPE4Q6UWF7 544 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 THOC6Q86W42 341 aaKnown RBP16.35■□□□□ 0.21
HOMER3-210ENST00000599097 SIAH3Q8IW03 269 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 GPALPP1Q8IXQ4 340 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 KRT78Q8N1N4 520 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 ARMC10Q8N2F6 343 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 TMEM156Q8N614 296 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 CHTF18Q8WVB6 975 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 GAL3ST3Q96A11 431 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 TSNARE1Q96NA8 513 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 OR4K3Q96R72 315 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 NPAS2Q99743 824 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
HOMER3-210ENST00000599097 IGKV3D-11A0A0A0MRZ8 115 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 FANCGO15287 622 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 SLC12A2P55011 1212 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 HSD17B7P56937 341 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 ADORA2A-AS1P86434 159 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 TGM3Q08188 693 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
HOMER3-210ENST00000599097 TMEM211Q6ICI0 200 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 PAOXQ6QHF9 649 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 SBSNQ6UWP8 590 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 B3GNT7Q8NFL0 401 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 CA5BP1Q8WTZ4 195 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 CFAP36Q96G28 342 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 VMP1Q96GC9 406 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 LURAP1Q96LR2 239 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 TRIM51Q9BSJ1 452 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 HES7Q9BYE0 225 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 TSPAN10Q9H1Z9 355 aaPredicted RBP16.34■□□□□ 0.21
HOMER3-210ENST00000599097 CNOT10Q9H9A5 744 aaKnown RBP16.34■□□□□ 0.21
HOMER3-210ENST00000599097 POPDC3Q9HBV1 291 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 OARD1Q9Y530 152 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 PKDREJQ9NTG1 2253 aa16.34■□□□□ 0.21
HOMER3-210ENST00000599097 MAOAP21397 527 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 ELK3P41970 407 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 ITGA8P53708 1063 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 RAB8AP61006 207 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 OLR1P78380 273 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 MGAT5Q09328 741 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 PPP1R3AQ16821 1122 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 TOR1AIP1Q5JTV8 583 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 STEAP4Q687X5 459 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 CYP4Z2PQ8N1L4 340 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 SLC35F6Q8N357 371 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 TCAIMQ8N3R3 496 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 SPOCK3Q9BQ16 436 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 TIMMDC1Q9NPL8 285 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 CTNNAL1Q9UBT7 734 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 CHMP2BQ9UQN3 213 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 SLC22A14Q9Y267 594 aa16.33■□□□□ 0.2
HOMER3-210ENST00000599097 TRBV11-1A0A0K0K1C0 115 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms