RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 A0A0G2JN53 185 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 PCDH17O14917 1159 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 TBX6O95947 436 aaPredicted RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 HPP00738 406 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 SBK3P0C264 359 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 PYGBP11216 843 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 PCNAP12004 261 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 IL10P22301 178 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 HPDP32754 393 aaPredicted RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 PIK3CGP48736 1102 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 BTN3A2P78410 334 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 EEF1A2Q05639 463 aaKnown RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 RAPSNQ13702 412 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 MINDY4Q4G0A6 757 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 LCA5Q86VQ0 697 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 LAS2Q8IYD9 372 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 GALNT16Q8N428 558 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 TMEM151AQ8N4L1 468 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 EPS8L3Q8TE67 593 aaKnown RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 AENQ8WTP8 325 aaKnown RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 FAR2Q96K12 515 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 OR1F2PQ96R84 312 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 REXO4Q9GZR2 422 aaKnown RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 IPPKQ9H8X2 491 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 ACTR8Q9H981 624 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 CLK4Q9HAZ1 481 aaKnown RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 GPR83Q9NYM4 423 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 TMEM216Q9P0N5 145 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.32
UPF1-205ENST00000598209 BOD1L1Q8NFC6 3051 aa13.08□□□□□ -0.32
UPF1-205ENST00000598209 KALRNO60229 2985 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 SPTA1P02549 2419 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 LOC102723996A0A087X1L8 192 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 A0A1W2PQ72 361 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 OR2W5A6NFC9 320 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 A8MT66 165 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 FOXO6A8MYZ6 492 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 CDC123O75794 336 aaPredicted RBP13.07□□□□□ -0.32
UPF1-205ENST00000598209 FHP07954 510 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 GSTA1P08263 222 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 CYC1P08574 325 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 C8orf89P0DMQ9 161 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 COX6A1P12074 109 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 ITGA3P26006 1051 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 PLA2G16P53816 162 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 SOX8P57073 446 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 MYBPC3Q14896 1274 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 RASA2Q15283 850 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 ADPRMQ3LIE5 342 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 LIPJQ5W064 366 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 TRIM40Q6P9F5 258 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 EMBQ6PCB8 327 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 TMEM205Q6UW68 189 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 PARP9Q8IXQ6 854 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 OR2L5Q8NG80 312 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 OR7G3Q8NG95 312 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 ZNF473Q8WTR7 871 aaKnown RBP13.07□□□□□ -0.32
UPF1-205ENST00000598209 METTL21AQ8WXB1 218 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 MS4A8Q9BY19 250 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 ZNF160Q9HCG1 818 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 LANCL2Q9NS86 450 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 PCTPQ9UKL6 214 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 ZNF451Q9Y4E5 1061 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 PCDHGB7Q9Y5F8 929 aa13.07□□□□□ -0.32
UPF1-205ENST00000598209 A0A088AWK7 358 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 IGHV1-45A0A0A0MS14 117 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 NSG1A0A0A6YYJ2 146 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 OR7A17O14581 309 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 UGDHO60701 494 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 CDH16O75309 829 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 RPS17P08708 135 aaKnown RBP13.06□□□□□ -0.32
UPF1-205ENST00000598209 RNH1P13489 461 aaKnown RBP13.06□□□□□ -0.32
UPF1-205ENST00000598209 KRT15P19012 456 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 TAC1P20366 129 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 ZNF10P21506 573 aaPredicted RBP13.06□□□□□ -0.32
UPF1-205ENST00000598209 JAK1P23458 1154 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 SERPINB1P30740 379 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 ARL1P40616 181 aaPredicted RBP13.06□□□□□ -0.32
UPF1-205ENST00000598209 CCNG1P51959 295 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 RHAGQ02094 409 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 TGM3Q08188 693 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 DDX39BQ13838 428 aaKnown RBP13.06□□□□□ -0.32
UPF1-205ENST00000598209 VWA5B1Q5TIE3 1220 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 ABHD17CQ6PCB6 329 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 LANCL3Q6ZV70 420 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 NDUFAF7Q7L592 441 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 ZNF605Q86T29 641 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 CA13Q8N1Q1 262 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 OR2W6PQ8NHA6 318 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
UPF1-205ENST00000598209 NSUN5Q96P11 429 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms