RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SERPINI1Q99574 410 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 YIPF2Q9BWQ6 316 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 AICDAQ9GZX7 198 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 NAALAD2Q9Y3Q0 740 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 TRAF6Q9Y4K3 522 aa21■□□□□ 0.95
CHMP2A-204ENST00000597848 SGK494L7N484 410 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 KLHL18O94889 574 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 CHEK2O96017 543 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 B3GALT4O96024 378 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 FBLP22087 321 aaKnown RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 HTR6P50406 440 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 SKP1P63208 163 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 BTN3A2P78410 334 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 ADPRMQ3LIE5 342 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 MLIPQ5VWP3 458 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF385CQ66K41 422 aaPredicted RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 LCN10Q6JVE6 187 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 AFAP1L2Q8N4X5 818 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 ARFGAP2Q8N6H7 521 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 SRFBP1Q8NEF9 429 aaKnown RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 SNIP1Q8TAD8 396 aaKnown RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 RAB3IL1Q8TBN0 382 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 C17orf62Q9BQA9 187 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 ILKAPQ9H0C8 392 aaPredicted RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 PSD3Q9NYI0 1048 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 IFT80Q9P2H3 777 aaPredicted RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 GPN3Q9UHW5 284 aaPredicted RBP20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 SLC12A4Q9UP95 1085 aa20.99■□□□□ 0.95
CHMP2A-204ENST00000597848 SDK2Q58EX2 2172 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF860A6NHJ4 632 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 C9J4A7 227 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 GALR3O60755 368 aaPredicted RBP20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 SNUPNO95149 360 aaKnown RBP20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 NSA2O95478 260 aaKnown RBP20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 FGF4P08620 206 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 SMIM10L1P0DMW3 83 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 TCN2P20062 427 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ITGAXP20702 1163 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 STAT5AP42229 794 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ABRAXAS2Q15018 415 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 NIPAL1Q6NVV3 410 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ABHD17CQ6PCB6 329 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ATG14Q6ZNE5 492 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 PDSS2Q86YH6 399 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 CT55Q8WUE5 264 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF75CPQ92670 426 aaPredicted RBP20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 RGMAQ96B86 450 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 SMIM10Q96HG1 83 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 C20orf27Q9GZN8 174 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 COPS7BQ9H9Q2 264 aaPredicted RBP20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 BRF2Q9HAW0 419 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 THAP1Q9NVV9 213 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 NMRK1Q9NWW6 199 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 ZDHHC2Q9UIJ5 367 aa20.98■□□□□ 0.95
CHMP2A-204ENST00000597848 CEP295Q9C0D2 2601 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 A0A088AWK7 358 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 TMEM233B4DJY2 109 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 C4orf51C9J302 202 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 H0YIG0 161 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 RDH16O75452 317 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 ETHE1O95571 254 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF10P21506 573 aaPredicted RBP20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF33BQ06732 778 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 CUL3Q13618 768 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 AP5B1Q2VPB7 878 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 KANK2Q63ZY3 851 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 HOMEZQ8IX15 550 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 LRRC8CQ8TDW0 803 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 ZCCHC14Q8WYQ9 949 aaKnown RBP20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 KIAA1143Q96AT1 154 aaPredicted RBP20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 KCNC2Q96PR1 638 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 TBCDQ9BTW9 1192 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 SLC22A11Q9NSA0 550 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 TRPC4Q9UBN4 977 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 CROTQ9UKG9 612 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 PPT2Q9UMR5 302 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 RAP2CQ9Y3L5 183 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 AKAP13Q12802 2813 aa20.97■□□□□ 0.95
CHMP2A-204ENST00000597848 LOC101059948A0A1B0GTJ6 334 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 RTCAO00442 366 aaKnown RBP20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 KLK10O43240 276 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 CAPNS1P04632 268 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 HSD3B1P14060 373 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 HSD3B2P26439 372 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 DLSTP36957 453 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 MAT1AQ00266 395 aaKnown RBP20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 CSTF3Q12996 717 aaKnown RBP20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 CLN3Q13286 438 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 DSG2Q14126 1118 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF517Q6ZMY9 492 aaPredicted RBP20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 UBE3DQ7Z6J8 389 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 ZNF781Q8N8C0 355 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 GBP7Q8N8V2 638 aaPredicted RBP20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 DCBLD2Q96PD2 775 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 SORT1Q99523 831 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 ROGDIQ9GZN7 287 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 PRDM7Q9NQW5 492 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 AHSPQ9NZD4 102 aa20.96■□□□□ 0.95
CHMP2A-204ENST00000597848 HCN3Q9P1Z3 774 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms