RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 CDC123O75794 336 aaPredicted RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 LDLRP01130 860 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 RNF224P0DH78 156 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 RNH1P13489 461 aaKnown RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 NCF1P14598 390 aaPredicted RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 OR4D2P58180 307 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 OLR1P78380 273 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 ZNF33BQ06732 778 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 CKAP4Q07065 602 aaKnown RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 TRADDQ15628 312 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 KBTBD12Q3ZCT8 623 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 TOR1AIP1Q5JTV8 583 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 CTAGE3PQ8IX95 158 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 SPATA6LQ8N4H0 392 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 PDPRQ8NCN5 879 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 DNAJB8Q8NHS0 232 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 SUN3Q8TAQ9 357 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 TSLPQ969D9 159 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 GAL3ST3Q96A11 431 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 WDR34Q96EX3 536 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 NPLQ9BXD5 320 aaPredicted RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 UNKQ9C0B0 810 aaKnown RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 AICDAQ9GZX7 198 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 OLAHQ9NV23 265 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 WWOXQ9NZC7 414 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 PLEKHB1Q9UF11 243 aaPredicted RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 PTBP2Q9UKA9 531 aaKnown RBP16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 PCDHGB6Q9Y5F9 930 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 HIVEP3Q5T1R4 2406 aa16.85■□□□□ 0.29
CHMP2A-203ENST00000597209 CLGNO14967 610 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 PRMT3O60678 531 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 PRAMEF2O60811 474 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 CLEC3AO75596 197 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 STK16O75716 305 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 HPDP32754 393 aaPredicted RBP16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 HNF4AP41235 474 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 SLC26A5P58743 744 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 SLBPQ14493 270 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 OR4D1Q15615 310 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 MEP1AQ16819 746 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 CCDC25Q86WR0 208 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 LGI4Q8N135 537 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 PPM1NQ8N819 430 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 STAG3L4Q8TBR4 150 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 ELP5Q8TE02 316 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 FBF1Q8TES7 1133 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 C5orf34Q96MH7 638 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 PTCHD1Q96NR3 888 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 TAAR6Q96RI8 345 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 PRDM9Q9NQV7 894 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 ABI3Q9P2A4 366 aa16.84■□□□□ 0.29
CHMP2A-203ENST00000597209 IGKV3D-11A0A0A0MRZ8 115 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 LRIT2A6NDA9 550 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 C4orf51C9J302 202 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 PSMD12O00232 456 aaPredicted RBP16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 B4GALT2O60909 372 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 F10P00742 488 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 CRABP2P29373 138 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 TDGF1P3P51864 188 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 E2F2Q14209 437 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 ADPRMQ3LIE5 342 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 C4orf17Q53FE4 359 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 CRLF3Q8IUI8 442 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 BEST3Q8N1M1 668 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 CA13Q8N1Q1 262 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 NR4A3Q92570 626 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 MS4A6EQ96DS6 147 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 PTCD3Q96EY7 689 aaKnown RBP16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 FAR2Q96K12 515 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 EFCAB11Q9BUY7 163 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 NMRAL1Q9HBL8 299 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 CD274Q9NZQ7 290 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 RNF112Q9ULX5 631 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 MMACHCQ9Y4U1 282 aa16.83■□□□□ 0.28
CHMP2A-203ENST00000597209 POLEQ07864 2286 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 A0A088AWK7 358 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 TCRBV16S1A1N1A0A5B0 115 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 CCDC189A1A4V9 331 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 ANKDD1BA6NHY2 528 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 PRAMEF4O60810 478 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 FAM155BO75949 473 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 RASAL1O95294 804 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 CRYABP02511 175 aaKnown RBP16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 SLC35E2BP0CK96 405 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 ZNF10P21506 573 aaPredicted RBP16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 CASP2P42575 452 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 KCNC1P48547 511 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 HSPA7P48741 367 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 TAS2R50P59544 299 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 BTN3A2P78410 334 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 BTG2P78543 158 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 LAPTM5Q13571 262 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 TBCCQ15814 346 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 PDK4Q16654 411 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 PRAMEF9Q5VWM5 478 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 LRRC70Q7Z2Q7 622 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 CCDC91Q7Z6B0 441 aa16.82■□□□□ 0.28
CHMP2A-203ENST00000597209 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms