RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 CCND1P24385 295 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 MSX1P28360 303 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 GRK3P35626 688 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 SARNPP82979 210 aaKnown RBP17.07■□□□□ 0.32
CIRBP-238ENST00000592412 HYAL2Q12891 473 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 SP140Q13342 867 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 CATSPEREQ5SY80 951 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 EID3Q8N140 333 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 ZFP62Q8NB50 900 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-238ENST00000592412 OR52N2Q8NGI0 321 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 LILRB4Q8NHJ6 448 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 NT5CQ8TCD5 201 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 UTP15Q8TED0 518 aaKnown RBP17.07■□□□□ 0.32
CIRBP-238ENST00000592412 TMEM125Q96AQ2 219 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 AICDAQ9GZX7 198 aa17.07■□□□□ 0.32
CIRBP-238ENST00000592412 C20orf96Q9NUD7 363 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-238ENST00000592412 TRMT6Q9UJA5 497 aaKnown RBP17.07■□□□□ 0.32
CIRBP-238ENST00000592412 KLF13Q9Y2Y9 288 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-238ENST00000592412 ZNF407Q9C0G0 2248 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 NAV3Q8IVL0 2385 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 TRBC2A0A5B9 178 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 FAM90A27PA6NNH2 459 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 A8MUA0 341 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 PEX1O43933 1283 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 CDC40O60508 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
CIRBP-238ENST00000592412 GABRB3P28472 473 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 SCTRP47872 440 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 CCR8P51685 355 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 CDKN2DP55273 166 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 GPR85P60893 370 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 HSP90AA5PQ58FG0 334 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 RBM20Q5T481 1227 aaKnown RBP17.06■□□□□ 0.32
CIRBP-238ENST00000592412 PAQR3Q6TCH7 311 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 STRA8Q7Z7C7 330 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 CCDC71Q8IV32 467 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-238ENST00000592412 DMRTC2Q8IXT2 367 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-238ENST00000592412 LMNTD2Q8IXW0 634 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 ANKRD53Q8N9V6 530 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 MCUQ8NE86 351 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 OR56A3Q8NH54 315 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 NRGNQ92686 78 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 SNF8Q96H20 258 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 SIGLEC10Q96LC7 697 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 DEFB126Q9BYW3 111 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 DEPPQ9NTK1 212 aa17.06■□□□□ 0.32
CIRBP-238ENST00000592412 SLC16A5O15375 505 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 KRT14P02533 472 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 SERPIND1P05546 499 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 SMIM10L1P0DMW3 83 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 CD1EP15812 388 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 CHRNB4P30926 498 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 ART1P52961 327 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 PGGT1BP53609 377 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 LRRC8EQ6NSJ5 796 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 C2CD4AQ8NCU7 369 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-238ENST00000592412 MAIP1Q8WWC4 291 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 ASB5Q8WWX0 329 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 SMIM10Q96HG1 83 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 HAUS8Q9BT25 410 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 SLC6A16Q9GZN6 736 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 KLHL31Q9H511 634 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 XAB2Q9HCS7 855 aaKnown RBP17.05■□□□□ 0.32
CIRBP-238ENST00000592412 PRDM9Q9NQV7 894 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 IARS2Q9NSE4 1012 aaKnown RBP17.05■□□□□ 0.32
CIRBP-238ENST00000592412 ZFATQ9P243 1243 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 ZFP69BQ9UJL9 534 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 CLDN16Q9Y5I7 305 aa17.05■□□□□ 0.32
CIRBP-238ENST00000592412 TRBV11-1A0A0K0K1C0 115 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 PINLYPA6NC86 204 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 KLRC4-KLRK1H3BQV0 150 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 TGFBR3LH3BV60 316 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 FCHO1O14526 889 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 PRKNO60260 465 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-238ENST00000592412 PDE9AO76083 593 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 CXCR5P32302 372 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 RAB8AP61006 207 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 DUPD1Q68J44 220 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 UGT3A1Q6NUS8 523 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 CYP4Z2PQ8N1L4 340 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 MYO1HQ8N1T3 1032 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 CALML6Q8TD86 181 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 NEIL2Q969S2 332 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 LINGO1Q96FE5 620 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 SEC16BQ96JE7 1060 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 TP63Q9H3D4 680 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-238ENST00000592412 IKZF3Q9UKT9 509 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 FLNAP21333 2647 aaKnown RBP17.04■□□□□ 0.32
CIRBP-238ENST00000592412 AKAP6Q13023 2319 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 DNAJC13O75165 2243 aa17.04■□□□□ 0.32
CIRBP-238ENST00000592412 PHF3Q92576 2039 aaKnown RBP17.03■□□□□ 0.32
CIRBP-238ENST00000592412 TMEM200CA6NKL6 621 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 ITGA10O75578 1167 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 HOXD4P09016 255 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-238ENST00000592412 DNAJA1P31689 397 aaKnown RBP17.03■□□□□ 0.32
CIRBP-238ENST00000592412 HNF4AP41235 474 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 RGS4P49798 205 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 GPR143P51810 404 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 NUP107P57740 925 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 REEP5Q00765 189 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 RGS1Q08116 209 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms