RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 EME2A4GXA9 379 aaPredicted RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 ASPDHA6ND91 283 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 AKAP10O43572 662 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 PGRP06401 933 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 SSR2P43308 183 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 DGKQP52824 942 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 TGM3Q08188 693 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 TLR1Q15399 786 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 DPY19L1Q2PZI1 675 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 TRIM40Q6P9F5 258 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 ABHD17CQ6PCB6 329 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 C16orf89Q6UX73 402 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 C16orf78Q8WTQ4 265 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 MYNNQ9NPC7 610 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 LNP1A1A4G5 178 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 C4orf51C9J302 202 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 P2RX6O15547 441 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 SH3BP5O60239 455 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 TSFMP43897 325 aaKnown RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 CFHR1Q03591 330 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 ZC3H12BQ5HYM0 836 aaKnown RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 WDR74Q6RFH5 385 aaPredicted RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 HACD2Q6Y1H2 254 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 DEFB107AQ8IZN7 70 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 ZNF655Q8N720 491 aaPredicted RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 KCT2Q8NC54 265 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 NAT6Q93015 286 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 GAL3ST3Q96A11 431 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 MCUR1Q96AQ8 359 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 ROPN1LQ96C74 230 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 TEFMQ96QE5 360 aaKnown RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 TBCDQ9BTW9 1192 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 CHRNA10Q9GZZ6 450 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 MAP10Q9P2G4 905 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 WBP11Q9Y2W2 641 aaKnown RBP16.61■□□□□ 0.25
CXXC1-212ENST00000589940 MN1Q10571 1320 aaPredicted RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 ASXL3Q9C0F0 2248 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 IGHV5-51A0A0C4DH38 117 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 SCAMP2O15127 329 aaKnown RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 C9P02748 559 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 RETP07949 1114 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 CSF2RBP32927 897 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 HPCAL1P37235 193 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 MAPK12P53778 367 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 TAS2R50P59544 299 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 SUZ12Q15022 739 aaKnown RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 IKBIPQ70UQ0 350 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 TMEM132CQ8N3T6 1108 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 RAB3IPQ96QF0 476 aaPredicted RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 CCDC3Q9BQI4 270 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 PRDM7Q9NQW5 492 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 KLHL3Q9UH77 587 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 PCDHGB2Q9Y5G2 931 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 A0A0A6YYD5 115 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 A0A0G2JN53 185 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 URADA6NGE7 173 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 ZSCAN9O15535 394 aaPredicted RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 RASSF9O75901 435 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 ZBTB11O95625 1053 aaPredicted RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 CKMT1AP12532 417 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 COX7A2P14406 83 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 S100A3P33764 101 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 GSTM5P46439 218 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 SRSF11Q05519 484 aaKnown RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 UGT8Q16880 541 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 PROX2Q3B8N5 592 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 PAGE3Q5JUK9 113 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 MANEAQ5SRI9 462 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 PERM1Q5SV97 790 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 FAM71E1Q6IPT2 247 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 ZNF793Q6ZN11 406 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 USP53Q70EK8 1073 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 PGAM4Q8N0Y7 254 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 DNAJC22Q8N4W6 341 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 UTP4Q969X6 686 aaKnown RBP16.6■□□□□ 0.25
CXXC1-212ENST00000589940 KCNH6Q9H252 994 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 WDR41Q9HAD4 459 aa16.6■□□□□ 0.25
CXXC1-212ENST00000589940 HCRTR1O43613 425 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 EIF2S1P05198 315 aaKnown RBP16.59■□□□□ 0.25
CXXC1-212ENST00000589940 HIST1H1TP22492 207 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-212ENST00000589940 PGM1P36871 562 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 RAB8AP61006 207 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 SQSTM1Q13501 440 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 PGS1Q32NB8 556 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 MCATQ8IVS2 390 aaKnown RBP16.59■□□□□ 0.25
CXXC1-212ENST00000589940 DPP10Q8N608 796 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 CSNK1A1LQ8N752 337 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 OR7A2PQ8NGA2 310 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 UTP15Q8TED0 518 aaKnown RBP16.59■□□□□ 0.25
CXXC1-212ENST00000589940 OR52E6Q96RD3 313 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 MMADHCQ9H3L0 296 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-212ENST00000589940 DNAAF2Q9NVR5 837 aaKnown RBP16.59■□□□□ 0.25
CXXC1-212ENST00000589940 SOHLH2Q9NX45 425 aa16.59■□□□□ 0.25
CXXC1-212ENST00000589940 TMPRSS11DO60235 418 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 IL3P08700 152 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 ZNF888P0CJ79 500 aaPredicted RBP16.58■□□□□ 0.25
CXXC1-212ENST00000589940 MLLT3P42568 568 aaPredicted RBP16.58■□□□□ 0.25
CXXC1-212ENST00000589940 KIR3DL1P43629 444 aa16.58■□□□□ 0.25
CXXC1-212ENST00000589940 VSX2P58304 361 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms