RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 NDUFS4O43181 175 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CCNT2O60583 730 aaKnown RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 KERAO60938 352 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 STK16O75716 305 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 DNAJB5O75953 348 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 KLHL2O95198 593 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ALDOAP04075 364 aaKnown RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 UMODP07911 640 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ZGLP1P0C6A0 271 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 MMP11P24347 488 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CXCR2P25025 360 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 AHRP35869 848 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 GGT5P36269 586 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 SLC6A12P48065 614 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 GLRBP48167 497 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 HSPA7P48741 367 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CCL11P51671 97 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 REEP5Q00765 189 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 IRF9Q00978 393 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 RGS1Q08116 209 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ZNF844Q08AG5 666 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 IFFO1Q0D2I5 559 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 DLG1Q12959 904 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CDC16Q13042 620 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 RBBP5Q15291 538 aaKnown RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 RBBP7Q16576 425 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 LGSNQ5TDP6 509 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CPZQ66K79 652 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CROCCP2Q86T23 111 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ISCA2Q86U28 154 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 KLHDC8AQ8IYD2 350 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 PRSS58Q8IYP2 241 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 KCT2Q8NC54 265 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ZNF740Q8NDX6 193 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 OR9A4Q8NGU2 314 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 OR2W6PQ8NHA6 318 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ZCCHC10Q8TBK6 192 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 STT3BQ8TCJ2 826 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 NACC2Q96BF6 587 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 TM4SF19Q96DZ7 209 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 VPS50Q96JG6 964 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 PKNOX2Q96KN3 472 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 FER1L6-AS2Q96M78 137 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 MACROD1Q9BQ69 325 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 TMEM79Q9BSE2 394 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 CRB3Q9BUF7 120 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 SARGQ9BW04 601 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 TRIM55Q9BYV6 548 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ROPN1BQ9BZX4 212 aaPredicted RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 ROPN1Q9HAT0 212 aaPredicted RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 ANKHQ9HCJ1 492 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 MKKSQ9NPJ1 570 aaPredicted RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 SEMA3GQ9NS98 782 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 P4HTMQ9NXG6 502 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 GPRC5BQ9NZH0 403 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 ZNF180Q9UJW8 692 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 PTBP2Q9UKA9 531 aaKnown RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 HEMK1Q9Y5R4 338 aaPredicted RBP9.83□□□□□ -0.84
SDF2-208ENST00000589788 LAMA5O15230 3695 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 SCN3AQ9NY46 2000 aa9.83□□□□□ -0.84
SDF2-208ENST00000589788 VSTM2BA6NLU5 285 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 UBXN8O00124 270 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 FFAR3O14843 346 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 GPR42O15529 346 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TAPBPO15533 448 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 FOXS1O43638 330 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 NSA2O95478 260 aaKnown RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 B3GALT4O96024 378 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 C1GALT1C1LP0DN25 315 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 IL1RNP18510 177 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 EPHA1P21709 976 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 KCNC1P48547 511 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SKP1P63208 163 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 KLC1Q07866 573 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PCDH1Q08174 1060 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PWP1Q13610 501 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ACAP2Q15057 778 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 RASA2Q15283 850 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PDK4Q16654 411 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 LACTB2Q53H82 288 aaPredicted RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 FBXO48Q5FWF7 155 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 VWA2Q5GFL6 755 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ATG9BQ674R7 924 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 LRRC70Q7Z2Q7 622 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PPP1R32Q7Z5V6 425 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TDRPQ86YL5 185 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CENPLQ8N0S6 344 aaPredicted RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 CNPY4Q8N129 248 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 KRT78Q8N1N4 520 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ARHGEF39Q8N4T4 335 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 AMER3Q8N944 861 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CLEC1AQ8NC01 280 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TRPV3Q8NET8 790 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 RHEBL1Q8TAI7 183 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 DCAKDQ8WVC6 231 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ESAMQ96AP7 390 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ATOH8Q96SQ7 321 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SLC25A23Q9BV35 468 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SPNS1Q9H2V7 528 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ZNF71Q9NQZ8 489 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms