RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 DDX31Q9H8H2 851 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SERHLQ9NQF3 203 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 CD300AQ9UGN4 299 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PILRAQ9UKJ1 303 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PRDM4Q9UKN5 801 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 EXO1Q9UQ84 846 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 BTBD3Q9Y2F9 522 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 WBP11Q9Y2W2 641 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 NCOR1O75376 2440 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TRBV5-3A0A0A0MS03 114 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 A0A0A6YYD5 115 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 A0A0J9YVX5 310 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 A0A1B0GTQ1 180 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 GABRR3A8MPY1 467 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 DFNA5O60443 496 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 SCN2BO60939 215 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ERN1O75460 977 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 B3GALT4O96024 378 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 FURINP09958 794 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 GIMD1P0DJR0 217 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 LAMP1P11279 417 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 HSD17B1P14061 328 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 HOXB9P17482 250 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 CDH3P22223 829 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 HOXD12P35452 270 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TSFMP43897 325 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 PLA2G16P53816 162 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 EEFSECP57772 596 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TRA2BP62995 288 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 PLIN5Q00G26 463 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 KLC1Q07866 573 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 FLOT2Q14254 428 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ANKRD26P1Q6NSI1 321 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 NANOGP8Q6NSW7 305 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 FBXO42Q6P3S6 717 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TRIM40Q6P9F5 258 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ABHD17CQ6PCB6 329 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF793Q6ZN11 406 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF438Q7Z4V0 828 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ANKRD46Q86W74 232 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 MSRB3Q8IXL7 192 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 SLC35F3Q8IY50 421 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 FAM156AQ8NDB6 213 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 SRFBP1Q8NEF9 429 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 OR8J3Q8NGG0 315 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 COQ8BQ96D53 544 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 KCNC2Q96PR1 638 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TEFMQ96QE5 360 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 MACROD1Q9BQ69 325 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 TBCDQ9BTW9 1192 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 BHLHE41Q9C0J9 482 aaPredicted RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 PAIP1Q9H074 479 aaKnown RBP10.87□□□□□ -0.67
SMAD4-205ENST00000588745 SEMA6CQ9H3T2 930 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 KLHL31Q9H511 634 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 NANOGQ9H9S0 305 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ATAD3AQ9NVI7 634 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 ZSCAN32Q9NX65 697 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 SLC25A37Q9NYZ2 338 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 VAPAQ9P0L0 249 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 RNF215Q9Y6U7 377 aa10.87□□□□□ -0.67
SMAD4-205ENST00000588745 A0A0G2JN53 185 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 RHPN2P1A8MT19 583 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 RNASET2O00584 256 aaKnown RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 RFXANKO14593 260 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ACOT8O14734 319 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 YKT6O15498 198 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TMPRSS11DO60235 418 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TBX19O60806 448 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 BCAS2O75934 225 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 SCELO95171 688 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 PSMG1O95456 288 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 LMNAP02545 664 aaKnown RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ST6GAL1P15907 406 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 DDCP20711 480 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 HIST1H1TP22492 207 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 PTPN6P29350 595 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TRPC1P48995 793 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 MTPNP58546 118 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 MS4A2Q01362 244 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 MC1RQ01726 317 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 LIPEQ05469 1076 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TGM3Q08188 693 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 LRRC74AQ0VAA2 488 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 BNIP2Q12982 314 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 CCNIQ14094 377 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 SELPLGQ14242 412 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 TRIM25Q14258 630 aaKnown RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 DUOXA1Q1HG43 343 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 GTDC1Q4AE62 458 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF385BQ569K4 471 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ANXA8L1Q5VT79 327 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 IRGCQ6NXR0 463 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 KANSL1Q7Z3B3 1105 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 BMP8AQ7Z5Y6 402 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 RABEPKQ7Z6M1 372 aa10.86□□□□□ -0.67
SMAD4-205ENST00000588745 ZCCHC7Q8N3Z6 543 aaKnown RBP10.86□□□□□ -0.67
SMAD4-205ENST00000588745 C19orf47Q8N9M1 422 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms