RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ZNF621Q6ZSS3 439 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 UBE3DQ7Z6J8 389 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 PROSER1Q86XN7 944 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 PQLC1Q8N2U9 271 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 MACROD1Q9BQ69 325 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 CPPED1Q9BRF8 314 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 DUSP15Q9H1R2 295 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 HRASLS2Q9NWW9 162 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 C6orf203Q9P0P8 240 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 ADAM29Q9UKF5 820 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 WBP11Q9Y2W2 641 aaKnown RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 CROCCQ5TZA2 2017 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 STATHP02808 62 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 EFNA1P20827 205 aaPredicted RBP18.93■□□□□ 0.62
TRIM47-204ENST00000587339 SSR2P43308 183 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 CSNK1EP49674 416 aaKnown RBP18.93■□□□□ 0.62
TRIM47-204ENST00000587339 HNRNPKP61978 463 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRIM47-204ENST00000587339 ADPRMQ3LIE5 342 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 WDR45BQ5MNZ6 344 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 ZNF761Q86XN6 746 aaPredicted RBP18.93■□□□□ 0.62
TRIM47-204ENST00000587339 DDX31Q9H8H2 851 aaKnown RBP18.93■□□□□ 0.62
TRIM47-204ENST00000587339 MAGEL2Q9UJ55 1249 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 ERVK-11Q9UQG0 969 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 AP4S1Q9Y587 144 aa18.93■□□□□ 0.62
TRIM47-204ENST00000587339 OR2A25A4D2G3 310 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 TNFSF14O43557 240 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 PDGFBP01127 241 aaPredicted RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 HYAL2Q12891 473 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 HEPACAMQ14CZ8 416 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 MUM1Q2TAK8 710 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 CWF19L1Q69YN2 538 aaKnown RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 TNIP2Q8NFZ5 429 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 MS4A6EQ96DS6 147 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 DUS3LQ96G46 650 aaKnown RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 AICDAQ9GZX7 198 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 KLHL31Q9H511 634 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 ABCA7Q8IZY2 2146 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 KNL1Q8NG31 2342 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 A0A0G2JN53 185 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 EVPLLA8MZ36 301 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 VILLO15195 856 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 PPM1DO15297 605 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 ERI3O43414 337 aaKnown RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 EPN2O95208 641 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 SLC7A1P30825 629 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 GSTM5P46439 218 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 AFF3P51826 1226 aaKnown RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 C21orf59P57076 290 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 KLC1Q07866 573 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 GLYATQ6IB77 296 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 SPESP1Q6UW49 350 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 TICAM1Q8IUC6 712 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 GOLM1Q8NBJ4 401 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 CANT1Q8WVQ1 401 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 TM4SF18Q96CE8 201 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 FAM120BQ96EK7 910 aaKnown RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 FCRL4Q96PJ5 515 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 KCNC2Q96PR1 638 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 TEFMQ96QE5 360 aaKnown RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 TBCDQ9BTW9 1192 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 SYNPO2LQ9H987 977 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 COPS7BQ9H9Q2 264 aaPredicted RBP18.92■□□□□ 0.62
TRIM47-204ENST00000587339 PCDHGB4Q9UN71 923 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 C15orf41Q9Y2V0 281 aa18.92■□□□□ 0.62
TRIM47-204ENST00000587339 SNRNP200O75643 2136 aaKnown RBP18.91■□□□□ 0.62
TRIM47-204ENST00000587339 TDRD6O60522 2096 aaKnown RBP18.91■□□□□ 0.62
TRIM47-204ENST00000587339 CCDC163A0A0D9SF12 145 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 CLIC1O00299 241 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 BCAT2O15382 392 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-204ENST00000587339 TMPRSS11DO60235 418 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 GMNNO75496 209 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 DDCP20711 480 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 HOXA6P31267 233 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 STXBP1P61764 594 aaKnown RBP18.91■□□□□ 0.62
TRIM47-204ENST00000587339 SLC5A12Q1EHB4 618 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 OOSP2Q86WS3 158 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 DTWD1Q8N5C7 304 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 AVL9Q8NBF6 648 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 SRFBP1Q8NEF9 429 aaKnown RBP18.91■□□□□ 0.62
TRIM47-204ENST00000587339 ZNF548Q8NEK5 533 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-204ENST00000587339 OR2L5Q8NG80 312 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 EFHD1Q9BUP0 239 aa18.91■□□□□ 0.62
TRIM47-204ENST00000587339 DHRS12A0PJE2 317 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ELOVL7A1L3X0 281 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 AQP9O43315 295 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 FKBP9O95302 570 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ENGP17813 658 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 PSMA4P25789 261 aaKnown RBP18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ARFIP1P53367 373 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 MAZP56270 477 aaKnown RBP18.9■□□□□ 0.62
TRIM47-204ENST00000587339 TRIP10Q15642 601 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 TOR1AIP1Q5JTV8 583 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 FBXO42Q6P3S6 717 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 TRIM40Q6P9F5 258 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ABHD17CQ6PCB6 329 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 FIGLAQ6QHK4 219 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 MMP21Q8N119 569 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 OR4A15Q8NGL6 344 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 SLCO4A1Q96BD0 722 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms