RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TEKQ02763 1124 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 IFI44LQ53G44 452 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 STEAP3Q658P3 488 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 ANGPTL8Q6UXH0 198 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 HSD11B1LQ7Z5J1 315 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CHST14Q8NCH0 376 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 COL21A1Q96P44 957 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CDADC1Q9BWV3 514 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 TRAV19A0A0A6YYK7 116 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CARNS1A5YM72 827 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 TBX1O43435 398 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 TLL1O43897 1013 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 SLC16A8O95907 504 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 C8AP07357 584 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 ADORA3P0DMS8 318 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 TIA1P31483 386 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 LIMK1P53667 647 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CASP9P55211 416 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CDH12P55289 794 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 HBA1P69905 142 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 SELENBP1Q13228 472 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 ZNF648Q5T619 568 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 LILRA6Q6PI73 481 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 ZNF852Q6ZMS4 543 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 KLHDC8AQ8IYD2 350 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 LGI4Q8N135 537 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 DEPDC4Q8N2C3 294 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 GOT1L1Q8NHS2 421 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 FOXJ1Q92949 421 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 CXorf40BQ96DE9 158 aa16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 BHLHE41Q9C0J9 482 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-205ENST00000587327 HELZP42694 1942 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 PRAMEF25A6NGN4 478 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 LEFTY2O00292 366 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 ZNF30P17039 623 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 RGS6P49758 472 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 SPIBQ01892 262 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 ZNF45Q02386 682 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 ST3GAL4Q11206 333 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 ELOAQ14241 798 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 EIF4HQ15056 248 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 EXOC3L2Q2M3D2 409 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 ZNF385BQ569K4 471 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 TPRG1LQ5T0D9 272 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 GDPD4Q6W3E5 623 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 Q6ZVL8 140 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 STX19Q8N4C7 294 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 KBTBD8Q8NFY9 601 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 OR4K1Q8NGD4 311 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 OR56A3Q8NH54 315 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 HTRA1Q92743 480 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 PRM3Q9NNZ6 103 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 THSD1Q9NS62 852 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 ATP6V1HQ9UI12 483 aa16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 LAMA2P24043 3122 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-205ENST00000587327 DOCK6Q96HP0 2047 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 LOC100506127A0A0U1RQW1 187 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 A8MVJ9 347 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PTHP01270 115 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 CATP04040 527 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 IMPA1P29218 277 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 HOXD12P35452 270 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SEPHS1P49903 392 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 RPS13P62277 151 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PRKCDQ05655 676 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SYTL3Q4VX76 610 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 ARMCX4Q5H9R4 360 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PNCKQ6P2M8 343 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 Q6ZVU0 165 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 POC5Q8NA72 575 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 UTP15Q8TED0 518 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 TMEM159Q96B96 161 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 TCF25Q9BQ70 676 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 FAM83CQ9BQN1 747 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SLC46A2Q9BY10 475 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 OR51E2Q9H255 320 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 CCDC59Q9P031 241 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SLC25A13Q9UJS0 675 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PCDHGA3Q9Y5H0 932 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 GRM6O15303 877 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 TSPAN6O43657 245 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 EFCAB14O75071 495 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PABPC1P11940 636 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 ITGA2P17301 1181 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 S100A5P33763 92 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 ETV3P41162 512 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PREPP48147 710 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 DCDC1P59894 354 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 OLR1P78380 273 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 RBBP4Q09028 425 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SCARB2Q14108 478 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 IRF3Q14653 427 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SOWAHCQ53LP3 525 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 GCNT6Q5T4J0 391 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 C10orf62Q5T681 223 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 OTOP2Q7RTS6 562 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 PARP16Q8N5Y8 322 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 SCAIQ8N9R8 606 aa16.17■□□□□ 0.18
PRKCSH-205ENST00000587327 OR52N2Q8NGI0 321 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms