RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CCR7P32248 378 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 GGT5P36269 586 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ARL1P40616 181 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 KCNC1P48547 511 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 MRPL19P49406 292 aaKnown RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 CLCNKAP51800 687 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 CCNG1P51959 295 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PNLIPRP1P54315 467 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 BTKQ06187 659 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 HSPA14Q0VDF9 509 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 TMEM115Q12893 351 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 RPA4Q13156 261 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 STX5Q13190 355 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 MAD2L1Q13257 205 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 ATP1A4Q13733 1029 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 GTF2H2Q13888 395 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 RPE65Q16518 533 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SPRED3Q2MJR0 410 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SMU1Q2TAY7 513 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PTCHD3Q3KNS1 767 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PLEKHN1Q494U1 663 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 SLC9B1Q4ZJI4 515 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 C10orf62Q5T681 223 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 OGFOD2Q6N063 350 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 GTF2H2CQ6P1K8 395 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 CYB5D1Q6P9G0 228 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ABRAXAS1Q6UWZ7 409 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 CHSY3Q70JA7 882 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 UBE2R2Q712K3 238 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 DET1Q7L5Y6 550 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SPATA19Q7Z5L4 167 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 TMEM126BQ8IUX1 230 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 CISD2Q8N5K1 135 aaKnown RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 LILRA3Q8N6C8 439 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 RASGEF1AQ8N9B8 481 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 FBXO15Q8NCQ5 510 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 ADAMTS17Q8TE56 1095 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 TRPC4APQ8TEL6 797 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 TWIST2Q8WVJ9 160 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SKA2Q8WVK7 121 aaPredicted RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 ASB11Q8WXH4 323 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ATP6V1E2Q96A05 226 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 RHBDF1Q96CC6 855 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ZDHHC12Q96GR4 267 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SERPINI1Q99574 410 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 TIMM29Q9BSF4 260 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SLC29A3Q9BZD2 475 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 CD244Q9BZW8 370 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ZBTB26Q9HCK0 441 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PDE7BQ9NP56 450 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SLAMF7Q9NQ25 335 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 IMP3Q9NV31 184 aaKnown RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 ARL8BQ9NVJ2 186 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ASF1BQ9NVP2 202 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 ARMCX1Q9P291 453 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 TRPS1Q9UHF7 1281 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 BCAP29Q9UHQ4 241 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PTBP2Q9UKA9 531 aaKnown RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 PRPF19Q9UMS4 504 aaKnown RBP7.49□□□□□ -1.21
VMP1-204ENST00000587259 SRPK3Q9UPE1 567 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 PRSS21Q9Y6M0 314 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 DYTNA2CJ06 578 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 OR6C74A6NCV1 312 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 NCF1BA6NI72 391 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 ZNF839A8K0R7 811 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 NCF1CA8MVU1 366 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 B2RBV5 119 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 ANKRD65E5RJM6 399 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 GFYI3L273 518 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 TOX3O15405 576 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 MGRN1O60291 552 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 PSIP1O75475 530 aaKnown RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 SKAP2O75563 359 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 STK16O75716 305 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 POP7O75817 140 aaKnown RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 SIX3O95343 332 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 MATN4O95460 622 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 LDLRP01130 860 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 KRT16P08779 473 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 T-ENOLP0DO92 83 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 PRF1P14222 555 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 NCF1P14598 390 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 LBPP18428 481 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 HMOX2P30519 316 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 ARL4DP49703 201 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 RPS15P62841 145 aaKnown RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 KLF10Q13118 480 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 CYLC2Q14093 348 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 NAA25Q14CX7 972 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 SNCBQ16143 134 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 GGTA1PQ4G0N0 100 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 ATP6AP1LQ52LC2 224 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 COQ5Q5HYK3 327 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 DOPEY1Q5JWR5 2465 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 WASHC2DQ5SRD0 308 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 VWA5B1Q5TIE3 1220 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 UNC5DQ6UXZ4 953 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 MAMDC2Q7Z304 686 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 SYVN1Q86TM6 617 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms