RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ATP6AP2O75787 350 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 PDYNP01213 254 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 IL6P05231 212 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ANKRD34CP0C6C1 535 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 CDH1P12830 882 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 COX4I1P13073 169 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 GABRA4P48169 554 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 HTR6P50406 440 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 HNRNPFP52597 415 aaKnown RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 KCNK10P57789 538 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 NCALDP61601 193 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 RPS15AP62244 130 aaKnown RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 TSTA3Q13630 321 aaPredicted RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 UBAP2LQ14157 1087 aaKnown RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 SNAP47Q5SQN1 464 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 MANEAQ5SRI9 462 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 PRAMEF9Q5VWM5 478 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 FCRL6Q6DN72 434 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 NIPAL1Q6NVV3 410 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ARMC6Q6NXE6 501 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ASRGL1Q7L266 308 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ARPINQ7Z6K5 226 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 TMPRSS12Q86WS5 348 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ZNF655Q8N720 491 aaPredicted RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 ZDHHC12Q96GR4 267 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ZNF764Q96H86 408 aaPredicted RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 C3orf30Q96M34 536 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 TRAPPC9Q96Q05 1148 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ACAT2Q9BWD1 397 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ROGDIQ9GZN7 287 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 CHRNA10Q9GZZ6 450 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ZNF768Q9H5H4 540 aaKnown RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 SYNPO2LQ9H987 977 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 FAM60AQ9NP50 221 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 DMRT3Q9NQL9 472 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 C1GALT1Q9NS00 363 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 CUEDC1Q9NWM3 386 aaPredicted RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 PRPF19Q9UMS4 504 aaKnown RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 CLCA2Q9UQC9 943 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 AP3M1Q9Y2T2 418 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 FREM2Q5SZK8 3169 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 A0A0J9YY10 115 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 SLC9B1P1A6NJY1 282 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 EIF4E1BA6NMX2 242 aaKnown RBP12.06□□□□□ -0.48
VMP1-202ENST00000585847 ANGPT2O15123 496 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 CFLARO15519 480 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 SEC22BO75396 215 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 CD22P20273 847 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 PRPS1L1P21108 318 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 GPX3P22352 226 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 GRIA3P42263 894 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 CORO7P57737 925 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 RPL38P63173 70 aaKnown RBP12.06□□□□□ -0.48
VMP1-202ENST00000585847 SF3A3Q12874 501 aaKnown RBP eCLIP12.06□□□□□ -0.48
VMP1-202ENST00000585847 TARDBPQ13148 414 aaKnown RBP eCLIP12.06□□□□□ -0.48
VMP1-202ENST00000585847 TRA2AQ13595 282 aaKnown RBP eCLIP12.06□□□□□ -0.48
VMP1-202ENST00000585847 SF1Q15637 639 aaKnown RBP12.06□□□□□ -0.48
VMP1-202ENST00000585847 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 C10orf67Q8IYJ2 551 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 BMPERQ8N8U9 685 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 OR2T11Q8NH01 316 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 HUS1BQ8NHY5 278 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 TESCQ96BS2 214 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 MTERF3Q96E29 417 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 PRR11Q96HE9 360 aaPredicted RBP12.06□□□□□ -0.48
VMP1-202ENST00000585847 SLC41A2Q96JW4 573 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 PPP1R36Q96LQ0 422 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 TMEM74Q96NL1 305 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 PRPF18Q99633 342 aaKnown RBP12.06□□□□□ -0.48
VMP1-202ENST00000585847 KLHL25Q9H0H3 589 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 ARL8BQ9NVJ2 186 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
VMP1-202ENST00000585847 SIDT1Q9NXL6 827 aaKnown RBP12.06□□□□□ -0.48
VMP1-202ENST00000585847 A0A088AWK7 358 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 A0A1W2PP18 115 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 OR2A25A4D2G3 310 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 URADA6NGE7 173 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 AGRPO00253 132 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 TXNDC9O14530 226 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 TOX3O15405 576 aaPredicted RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 MAP3K7O43318 606 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 DNAJA2O60884 412 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 GUCY1B2O75343 617 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 CBX6O95503 412 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 CTSBP07858 339 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 ALDOCP09972 364 aaKnown RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 T-ENOLP0DO92 83 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 PCNAP12004 261 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 MAGP20916 626 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 ZNF10P21506 573 aaPredicted RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 CDH3P22223 829 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 ETV5P41161 510 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 SEPHS1P49903 392 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 CLDN8P56748 225 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 TRA2BP62995 288 aaKnown RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 SKP1P63208 163 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 CSNK1G2P78368 415 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 MXRA7P84157 204 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms