RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 ERI3O43414 337 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 VNN2O95498 520 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 HSD11B1P28845 292 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 RAB5BP61020 215 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 SERINC3Q13530 473 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 TWNKQ96RR1 684 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 C14orf119Q9NWQ9 140 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 EBF1Q9UH73 591 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 RNF11Q9Y3C5 154 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 BORCS7-ASMTA0A0B4J1R7 106 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 AOC2O75106 756 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 CSTBP04080 98 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 GGT5P36269 586 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 PNCKQ6P2M8 343 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 CYP4V2Q6ZWL3 525 aaPredicted RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 OR8J1Q8NGP2 316 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 OR10Q1Q8NGQ4 319 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 PEX13Q92968 403 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 FUNDC2Q9BWH2 189 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 FAM118AQ9NWS6 357 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 LOC100509620A0A075B734 347 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 A6NHS1 94 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 RBBP9O75884 186 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 AGTR1P30556 359 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 PGDP52209 483 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 DIO3P55073 304 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 ZNF763Q0D2J5 394 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 GDPD4Q6W3E5 623 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 DOHHQ9BU89 302 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 TBL1XR1Q9BZK7 514 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 KIAA0513O60268 411 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 PCDHGA12O60330 932 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 H2AFB2P0C5Z0 115 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 CELP19835 753 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 TM4SF1P30408 202 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 FNTBP49356 437 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 TAS2R50P59544 299 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 LHFPL3Q86UP9 236 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF43-208ENST00000584437 CD300LFQ8TDQ1 290 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 MOAP1Q96BY2 351 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 COPZ2Q9P299 210 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 ZNF726A6NNF4 738 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 ZNF14P17017 642 aaPredicted RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 ZNF30P17039 623 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 CD40LGP29965 261 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 GLP1RP43220 463 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 RPS24P62847 133 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 ACTC1P68032 377 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 ACTA1P68133 377 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 LAPTM4AQ15012 233 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 ALG10Q5BKT4 473 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 SLC27A4Q6P1M0 643 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 MOB2Q70IA6 237 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 DDX1Q92499 740 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 CCDC86Q9H6F5 360 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 SMOXQ9NWM0 555 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
RNF43-208ENST00000584437 CLCA3PQ9Y6N3 262 aa12.62□□□□□ -0.39
RNF43-208ENST00000584437 TEX13CA0A0J9YWL9 993 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 MYOCOSA0A1B0GUC4 107 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 DUSP11O75319 330 aaKnown RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 C6orf47O95873 294 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 JUNP05412 331 aaKnown RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 TECRLQ5HYJ1 363 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 POGLUT1Q8NBL1 392 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 CAMKVQ8NCB2 501 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 FBXO15Q8NCQ5 510 aaPredicted RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 BBS10Q8TAM1 723 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 SLC25A36Q96CQ1 311 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 BEX2Q9BXY8 128 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 MTG2Q9H4K7 406 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 BEX1Q9HBH7 125 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 ABCB8Q9NUT2 735 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 FUOMA2VDF0 154 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 J3KR12 359 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 ALDOAP04075 364 aaKnown RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 FGL1Q08830 312 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 PPP1R3AQ16821 1122 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 LIPKQ5VXJ0 399 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 LCN8Q6JVE9 175 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 AGTRAPQ6RW13 159 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 TMIGD1Q6UXZ0 262 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 TICAM1Q8IUC6 712 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 NPY6RQ99463 290 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 PIP5K1AQ99755 562 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 AIG1Q9NVV5 245 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 STUB1Q9UNE7 303 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms