RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CEP68Q76N32 757 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 SLC7A5P1Q8MH63 180 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 OR5AK3PQ8NH89 298 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 HPS1Q92902 700 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 CIDECQ96AQ7 238 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 NRBF2Q96F24 287 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF514Q96K75 400 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-205ENST00000582730 DMRT3Q9NQL9 472 aa13.13□□□□□ -0.31
SRSF1-205ENST00000582730 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 C6orf47O95873 294 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 OPN1SWP03999 348 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 RB1P06400 928 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 PCSK2P16519 638 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 AGXTP21549 392 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 CPZQ66K79 652 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 NXPE4Q6UWF7 544 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 KLK6Q92876 244 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 RDH12Q96NR8 316 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 ZDHHC5Q9C0B5 715 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 RUBCNLQ9H714 662 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 PAPLNO95428 1278 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 LBX1P52954 281 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 TAS2R50P59544 299 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 CD47Q08722 323 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF846Q147U1 533 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 PDGFRLQ15198 375 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 DCP2Q8IU60 420 aaKnown RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 CHPFQ8IZ52 775 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 NAGSQ8N159 534 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 OR2L2Q8NH16 312 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 TFGQ92734 400 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 PPCDCQ96CD2 204 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 C11orf24Q96F05 449 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 TMEM245Q9H330 911 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 IL1RAPQ9NPH3 570 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 WARS2Q9UGM6 360 aaKnown RBP13.12□□□□□ -0.31
SRSF1-205ENST00000582730 TAC3Q9UHF0 121 aa13.12□□□□□ -0.31
SRSF1-205ENST00000582730 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 BCKDKO14874 412 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ABCB7O75027 752 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 BCAS1O75363 584 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 JRKO75564 520 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 DEPDC1Q5TB30 811 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF765Q7L2R6 523 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ATG16L2Q8NAA4 619 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 RAD51AP1Q96B01 352 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 SGPP1Q9BX95 441 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 LGR4Q9BXB1 951 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 REEP4Q9H6H4 257 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 USE1Q9NZ43 259 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 SLC23A2Q9UGH3 650 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 MID1O15344 667 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ETFAP13804 333 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 HBA1P69905 142 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 RGNQ15493 299 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 CTU2Q2VPK5 515 aaKnown RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF658BQ4V348 819 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 CHDHQ8NE62 594 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 GANCQ8TET4 914 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 SLC35A5Q9BS91 424 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 MIEF1Q9NQG6 463 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 AASSQ9UDR5 926 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 PCM1Q15154 2024 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 PI15O43692 258 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 VEGFDO43915 354 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 KAT7O95251 611 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 IFITM3Q01628 133 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 OCA2Q04671 838 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 DPTQ07507 201 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 KCNJ8Q15842 424 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 SHQ1Q6PI26 577 aaKnown RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 TMIGD1Q6UXZ0 262 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 CNIH3Q8TBE1 160 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ZFP90Q8TF47 636 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 FUNDC2Q9BWH2 189 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 REEP1Q9H902 201 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF282Q9UDV7 671 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 TMEFF2Q9UIK5 374 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 BTNL2Q9UIR0 455 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 EXO1Q9UQ84 846 aaKnown RBP13.11□□□□□ -0.31
SRSF1-205ENST00000582730 MAP4K5Q9Y4K4 846 aa13.11□□□□□ -0.31
SRSF1-205ENST00000582730 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms