RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 PTGESO14684 152 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ZNF821O75541 412 aaPredicted RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 DDHD2O94830 711 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 REC8O95072 547 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 IFNB1P01574 187 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 GPIP06744 558 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 OR52Z1P0C646 297 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 DARSP14868 501 aaKnown RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 RPS2P15880 293 aaKnown RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 FERP16591 822 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 CD22P20273 847 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 EEF1B2P24534 225 aaKnown RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 ASCL1P50553 236 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ERVK11-1P61568 191 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 GBE1Q04446 702 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 YWHAHQ04917 246 aaPredicted RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 RBPJQ06330 500 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ITPK1Q13572 414 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 CUL3Q13618 768 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 TUBB2AQ13885 445 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 HERC3Q15034 1050 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 KBTBD12Q3ZCT8 623 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 C14orf177Q52M58 125 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 TCTE1Q5JU00 501 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 MPP7Q5T2T1 576 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 PWWP2BQ6NUJ5 590 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ZCCHC12Q6PEW1 402 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 Q6ZSR9 355 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 SMIM5Q71RC9 77 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 MFN1Q8IWA4 741 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 KIRREL3Q8IZU9 778 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 LGI2Q8N0V4 545 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ZNF611Q8N823 705 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 NIPA2Q8N8Q9 360 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 OR13C3Q8NGS6 347 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 MRGPRDQ8TDS7 321 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ANKRD49Q8WVL7 239 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 SHC3Q92529 594 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 DYRK2Q92630 601 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 SYAP1Q96A49 352 aaPredicted RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 OTUB1Q96FW1 271 aaPredicted RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 GMPPAQ96IJ6 420 aaPredicted RBP3.9□□□□□ -1.79
NF1-220ENST00000581113 ZNF558Q96NG5 402 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 GSDMAQ96QA5 445 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 TUBB2BQ9BVA1 445 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 PANK2Q9BZ23 570 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 PRRG4Q9BZD6 226 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 P2RY12Q9H244 342 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 CPVLQ9H3G5 476 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 ATAD3AQ9NVI7 634 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 CFAP45Q9UL16 551 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 QSER1Q2KHR3 1735 aa3.9□□□□□ -1.79
NF1-220ENST00000581113 UTRNP46939 3433 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 COL24A1Q17RW2 1714 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 TOGARAM1Q9Y4F4 1720 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 A0A087X002 238 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ZSCAN5CA6NGD5 496 aaPredicted RBP3.89□□□□□ -1.79
NF1-220ENST00000581113 CACNB4O00305 520 aaPredicted RBP3.89□□□□□ -1.79
NF1-220ENST00000581113 CLDN4O14493 209 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ARPC2O15144 300 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ZBTB14O43829 449 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 KIAA0754O94854 1291 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 HEXBP07686 556 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 PDHBP11177 359 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 IRF2P14316 349 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ACHEP22303 614 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 HOXD10P28358 340 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 EEF1DP29692 281 aaKnown RBP3.89□□□□□ -1.79
NF1-220ENST00000581113 CSTF2P33240 577 aaKnown RBP eCLIP3.89□□□□□ -1.79
NF1-220ENST00000581113 SULT1E1P49888 294 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 GPC3P51654 580 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 POLR2LP62875 67 aaKnown RBP3.89□□□□□ -1.79
NF1-220ENST00000581113 GCNT1Q02742 428 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ACSM1Q08AH1 577 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 CBX3Q13185 183 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 TEAD2Q15562 447 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 RABL6Q3YEC7 729 aaPredicted RBP3.89□□□□□ -1.79
NF1-220ENST00000581113 KRBOX4Q5JUW0 171 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 SUSD1Q6UWL2 747 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 RGS9BPQ6ZS82 235 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 RAB42Q8N4Z0 105 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 PI4KAP1Q8N8J0 262 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 OR4K1Q8NGD4 311 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 FBXO30Q8TB52 745 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ROBO4Q8WZ75 1007 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 WBP2Q969T9 261 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 MAGED4Q96JG8 741 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 CCDC114Q96M63 670 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 CFAP57Q96MR6 1250 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 MUS81Q96NY9 551 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ATP6V0BQ99437 205 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 FEVQ99581 238 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ASCL2Q99929 193 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 CITED2Q99967 270 aaPredicted RBP3.89□□□□□ -1.79
NF1-220ENST00000581113 KRT23Q9C075 422 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 SHARPINQ9H0F6 387 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 ERVMER34-1Q9H9K5 563 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 CDH20Q9HBT6 801 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 PPANQ9NQ55 473 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms