RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 OR4F21O95013 312 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 STATHP02808 62 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 CAPN1P07384 714 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 SERPINA6P08185 405 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 KITP10721 976 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 TSPAN8P19075 237 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 AGXTP21549 392 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 ALAS2P22557 587 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 HMOX2P30519 316 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 STAT5AP42229 794 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 STXBP1P61764 594 aaKnown RBP14.75□□□□□ -0.05
SS18-216ENST00000580751 SKP1P63208 163 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 FAM53BQ14153 422 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 CPSF6Q16630 551 aaKnown RBP eCLIP14.75□□□□□ -0.05
SS18-216ENST00000580751 SMU1Q2TAY7 513 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 TMEM214Q6NUQ4 689 aaKnown RBP14.75□□□□□ -0.05
SS18-216ENST00000580751 NIPAL1Q6NVV3 410 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 PRMT9Q6P2P2 845 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 PROSER1Q86XN7 944 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 ARHGEF39Q8N4T4 335 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 IL22RA1Q8N6P7 574 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 KDF1Q8NAX2 398 aaPredicted RBP14.75□□□□□ -0.05
SS18-216ENST00000580751 OR7G3Q8NG95 312 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 CREB3L4Q8TEY5 395 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 TWIST2Q8WVJ9 160 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 CCT6BQ92526 530 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 MR1Q95460 341 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 NKD1Q969G9 470 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 KIAA1143Q96AT1 154 aaPredicted RBP14.75□□□□□ -0.05
SS18-216ENST00000580751 RNF31Q96EP0 1072 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 METTL2AQ96IZ6 378 aaKnown RBP14.75□□□□□ -0.05
SS18-216ENST00000580751 CDK15Q96Q40 435 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 PRM3Q9NNZ6 103 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 LHX9Q9NQ69 397 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 ACSS2Q9NR19 701 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 MARCOQ9UEW3 520 aaPredicted RBP14.75□□□□□ -0.05
SS18-216ENST00000580751 PPT2Q9UMR5 302 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 CDC14AQ9UNH5 594 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 TRIM33Q9UPN9 1127 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 RNF11Q9Y3C5 154 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 MAP1BP46821 2468 aaKnown RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 DMXL2Q8TDJ6 3036 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 C9J4A7 227 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 NPIPB8E9PQR5 432 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 ULK1O75385 1050 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 DCTN3O75935 186 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 PIM1P11309 404 aaPredicted RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 PCNAP12004 261 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 HSD3B1P14060 373 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 HSD3B2P26439 372 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 EIF2S3P41091 472 aaKnown RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 PIK3CBP42338 1070 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 IDH3AP50213 366 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 DCDP81605 110 aaKnown RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 CLN3Q13286 438 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 HERC3Q15034 1050 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 ZRSR2Q15696 482 aaKnown RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 C1orf189Q5VU69 101 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 ZNF385CQ66K41 422 aaPredicted RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 ZNF517Q6ZMY9 492 aaPredicted RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 ACAD11Q709F0 780 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 ABHD13Q7L211 337 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 TRIM46Q7Z4K8 759 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 PARP9Q8IXQ6 854 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 CDYL2Q8N8U2 506 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 GBP7Q8N8V2 638 aaPredicted RBP14.74□□□□□ -0.05
SS18-216ENST00000580751 KCT2Q8NC54 265 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 RFWD2Q8NHY2 731 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 ZCCHC10Q8TBK6 192 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 C19orf60Q96EN9 201 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 MACROD1Q9BQ69 325 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 TMEM120AQ9BXJ8 343 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 FAM117AQ9C073 453 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 SLC6A16Q9GZN6 736 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 RIC8BQ9NVN3 520 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 DCTN4Q9UJW0 460 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 SLC22A7Q9Y694 548 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 CELSR3Q9NYQ7 3312 aa14.74□□□□□ -0.05
SS18-216ENST00000580751 URB1O60287 2271 aaKnown RBP14.73□□□□□ -0.05
SS18-216ENST00000580751 C21orf140B9A014 251 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 SLC28A1O00337 649 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 CCDC22O60826 627 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 MED26O95402 600 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 AVPR1BP47901 424 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 BTKQ06187 659 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 IFT88Q13099 833 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 TGIF1Q15583 401 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 NKAIN1Q4KMZ8 207 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 SPDYAQ5MJ70 313 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 FRG2Q64ET8 278 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 VN1R5Q7Z5H4 357 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 CEP70Q8NHQ1 597 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 AGR3Q8TD06 166 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 GAL3ST3Q96A11 431 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 NAF1Q96HR8 494 aaKnown RBP14.73□□□□□ -0.05
SS18-216ENST00000580751 FRG2BQ96QU4 278 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 EFHD1Q9BUP0 239 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 SHCBP1LQ9BZQ2 653 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 ELOVL6Q9H5J4 265 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 ANKHQ9HCJ1 492 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms