RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SLCO4C1Q6ZQN7 724 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 CRLF3Q8IUI8 442 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 GAL3ST3Q96A11 431 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 MOCOSQ96EN8 888 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 MAGEB10Q96LZ2 347 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 CPNE1Q99829 537 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 MACROD1Q9BQ69 325 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 ERP44Q9BS26 406 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 SLC17A6Q9P2U8 582 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 CTNNAL1Q9UBT7 734 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 SEC14L3Q9UDX4 400 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 ZNF835Q9Y2P0 537 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 SAGE2PA6NJ88 616 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 CDC7O00311 574 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 ZNF888P0CJ79 500 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 CD96P40200 585 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 CA7P43166 264 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 RPL21P46778 160 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 HSD17B7P56937 341 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 OR4D2P58180 307 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 CAV1Q03135 178 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 RCN2Q14257 317 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 TGFBIQ15582 683 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 ZKSCAN8Q15776 578 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 TBCCQ15814 346 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 GFRALQ6UXV0 394 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 TMPRSS11BQ86T26 416 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 BEST3Q8N1M1 668 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 POGLUT1Q8NBL1 392 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 FAM98AQ8NCA5 519 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 PYROXD1Q8WU10 500 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 ALKBH8Q96BT7 664 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 UBXN10Q96LJ8 280 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 PWWP2AQ96N64 755 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 GPR22Q99680 433 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 NPAS2Q99743 824 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 TRIM51Q9BSJ1 452 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 RHBGQ9H310 441 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
SMARCE1-216ENST00000580419 IGHV3-20A0A0C4DH32 117 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 A1L4Q6 167 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 LRIT2A6NDA9 550 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 A8MUI8 341 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 PSMD12O00232 456 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 HNRNPRO43390 633 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 NEURL1O76050 574 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 EEF1DP29692 281 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 GP5P40197 560 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 CASP2P42575 452 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 SLC12A2P55011 1212 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 NAB1Q13506 487 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 FASTKD3Q14CZ7 662 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 SULT1C3Q6IMI6 304 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 XKRXQ6PP77 449 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 FRA10AC1Q70Z53 315 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 RPS19BP1Q86WX3 136 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 ANKMY2Q8IV38 441 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 CEP97Q8IW35 865 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 SCUBE1Q8IWY4 988 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 ZBED8Q8IZ13 594 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 ZNF808Q8N4W9 903 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 PDPRQ8NCN5 879 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 NFAM1Q8NET5 270 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 ANKRD49Q8WVL7 239 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 PTCHD1Q96NR3 888 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 RUBCNLQ9H714 662 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 TXNDC16Q9P2K2 825 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 DNAJC13O75165 2243 aa13.59□□□□□ -0.23
SMARCE1-216ENST00000580419 FAM159BA6NKW6 160 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 UNC5CO95185 931 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 C1QAP02745 245 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 STATHP02808 62 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 SP1P08047 785 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 STMN1P16949 149 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 TFEBP19484 476 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 MST1P26927 711 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 SERPINB1P30740 379 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 HLCSP50747 726 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 ARFIP1P53367 373 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 CASP6P55212 293 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 MLF1P58340 268 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 LAPTM5Q13571 262 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 OR1C1Q15619 314 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
SMARCE1-216ENST00000580419 SRFBP1Q8NEF9 429 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms