RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 TREX1Q9NSU2 369 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 ABCF3Q9NUQ8 709 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 INTS7Q9NVH2 962 aaKnown RBP3.81□□□□□ -1.8
DDX42-211ENST00000580108 GEMIN8Q9NWZ8 242 aaKnown RBP3.81□□□□□ -1.8
DDX42-211ENST00000580108 PAK5Q9P286 719 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 DHCR7Q9UBM7 475 aaKnown RBP3.81□□□□□ -1.8
DDX42-211ENST00000580108 KCND3Q9UK17 655 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 PYCARDQ9ULZ3 195 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 SH2B3Q9UQQ2 575 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 PLAAQ9Y263 795 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 ASF1AQ9Y294 204 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 BTRCQ9Y297 605 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 CRYL1Q9Y2S2 319 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 HEMK1Q9Y5R4 338 aaPredicted RBP3.81□□□□□ -1.8
DDX42-211ENST00000580108 LRRK2Q5S007 2527 aa3.81□□□□□ -1.8
DDX42-211ENST00000580108 LOC105369274A0A096LPK9 316 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 LOC102723532A0A0G2JNH3 316 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 A0A0J9YY10 115 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 C17orf113A0A1B0GUU1 675 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 GOLGA6L3A6NEY3 463 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 ARHGEF33A8MVX0 844 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 C2orf74A8MZ97 194 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 H3BMH7 237 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 IFRD1O00458 451 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 LIN7AO14910 233 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 PSMD3O43242 534 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 KIF5CO60282 957 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CTSVO60911 334 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 GPC4O75487 556 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 AP2A2O94973 939 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CCDC175P0C221 793 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 OR56A5P0C7T3 313 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 RNF224P0DH78 156 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 ZNF37AP17032 561 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 CYP2A7P20853 494 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 NDUFS1P28331 727 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 STIP1P31948 543 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 RORAP35398 523 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 COILP38432 576 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 NSG1P42857 185 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CCL11P51671 97 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 GSDMDP57764 484 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 TUBB4BP68371 445 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 PDE1BQ01064 536 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 ACY1Q03154 408 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 SRSF1Q07955 248 aaKnown RBP eCLIP3.8□□□□□ -1.83e-6■■■■□ 20.2
DDX42-211ENST00000580108 PRKAA1Q13131 559 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CTBP1Q13363 440 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CUL1Q13616 776 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 TSTA3Q13630 321 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 ATP1A4Q13733 1029 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 TUBB2AQ13885 445 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 IL11RAQ14626 422 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 KYNUQ16719 465 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 NADK2Q4G0N4 442 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 LACTB2Q53H82 288 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 FASTKD1Q53R41 847 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 PCID2Q5JVF3 399 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 RBM20Q5T481 1227 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 MLIPQ5VWP3 458 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 ZNF470Q6ECI4 717 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 PTRHD1Q6GMV3 140 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 ZNF549Q6P9A3 640 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 LRRC8BQ6P9F7 803 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 KLHL35Q6PF15 583 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 FIGLAQ6QHK4 219 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 SPESP1Q6UW49 350 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 SUSD1Q6UWL2 747 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 PACS1Q6VY07 963 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 MBOAT1Q6ZNC8 495 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 SHISA6Q6ZSJ9 500 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CENPUQ71F23 418 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 COX15Q7KZN9 410 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 GDF7Q7Z4P5 450 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 LINC00523Q86TU6 105 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 DENND6AQ8IWF6 608 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 PRSS58Q8IYP2 241 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 SLC22A15Q8IZD6 547 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 DSELQ8IZU8 1212 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 OR4N4Q8N0Y3 316 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 DNAJC22Q8N4W6 341 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 ZBTB2Q8N680 514 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 GLB1L3Q8NCI6 653 aaPredicted RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 PPFIBP2Q8ND30 876 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 LSM14AQ8ND56 463 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 OR5M3Q8NGP4 307 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 DENND1AQ8TEH3 1009 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CPT1BQ92523 772 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 LPGAT1Q92604 370 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.8□□□□□ -1.8
DDX42-211ENST00000580108 MAGOHBQ96A72 148 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 CAPZA3Q96KX2 299 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 ALS2CR12Q96Q35 445 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 CD180Q99467 661 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 WDR83Q9BRX9 315 aaKnown RBP3.8□□□□□ -1.8
DDX42-211ENST00000580108 ZPBPQ9BS86 351 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 TRIM51Q9BSJ1 452 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 TUBB2BQ9BVA1 445 aa3.8□□□□□ -1.8
DDX42-211ENST00000580108 NUDT9Q9BW91 350 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms