RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 RCBTB1Q8NDN9 531 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 UTP15Q8TED0 518 aaKnown RBP10.22□□□□□ -0.77
SS18-213ENST00000579640 FAM122AQ96E09 287 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 SMIM10Q96HG1 83 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 CATSPER2Q96P56 530 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 C1orf50Q9BV19 199 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 BRINP2Q9C0B6 783 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 AICDAQ9GZX7 198 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 KLHL31Q9H511 634 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 ZNF385DQ9H6B1 395 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 DDX31Q9H8H2 851 aaKnown RBP10.22□□□□□ -0.77
SS18-213ENST00000579640 SAR1AQ9NR31 198 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 FGF21Q9NSA1 209 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 TMEM45AQ9NWC5 275 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 IRAK4Q9NWZ3 460 aa10.22□□□□□ -0.77
SS18-213ENST00000579640 WBP11Q9Y2W2 641 aaKnown RBP10.22□□□□□ -0.77
SS18-213ENST00000579640 POLR3HQ9Y535 204 aaPredicted RBP10.22□□□□□ -0.77
SS18-213ENST00000579640 ARHGAP10A1A4S6 786 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 FCHO1O14526 889 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 SLC30A4O14863 429 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 TM4SF5O14894 197 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 PCDH7O60245 1069 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 OR2B3O76000 313 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 SCELO95171 688 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 STATHP02808 62 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 BCKDHAP12694 445 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 CEACAM1P13688 526 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 ALOX12P18054 663 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 BSGP35613 385 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 SSR2P43308 183 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 PDX1P52945 283 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 PLA2G16P53816 162 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 TRA2BP62995 288 aaKnown RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 FAM53BQ14153 422 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 GPR19Q15760 415 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 FAM214AQ32MH5 1076 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 CCDC157Q569K6 752 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 UBE3DQ7Z6J8 389 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 B3GNT8Q7Z7M8 397 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 KIAA2013Q8IYS2 634 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 COL27A1Q8IZC6 1860 aaPredicted RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 MIER2Q8N344 545 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 ZCCHC7Q8N3Z6 543 aaKnown RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 ZNF501Q96CX3 271 aaPredicted RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 DEPDC7Q96QD5 511 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 MACROD1Q9BQ69 325 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 C17orf62Q9BQA9 187 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 ZNF717Q9BY31 904 aaPredicted RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 NMUR2Q9GZQ4 415 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 MYLK2Q9H1R3 596 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 COPS7BQ9H9Q2 264 aaPredicted RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 PRDM7Q9NQW5 492 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 SDR39U1Q9NRG7 319 aaPredicted RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 SIDT1Q9NXL6 827 aaKnown RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 ZIM2Q9NZV7 527 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 MAPRE3Q9UPY8 281 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 GPR45Q9Y5Y3 372 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 COPG1Q9Y678 874 aaKnown RBP10.21□□□□□ -0.77
SS18-213ENST00000579640 PCNX2A6NKB5 2137 aa10.21□□□□□ -0.77
SS18-213ENST00000579640 HYKKA2RU49 373 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 H3BMH7 237 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 MT-CO3P00414 261 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 KLK1P06870 262 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 ANXA4P09525 319 aaPredicted RBP10.21□□□□□ -0.78
SS18-213ENST00000579640 ZNF888P0CJ79 500 aaPredicted RBP10.21□□□□□ -0.78
SS18-213ENST00000579640 G6PDP11413 515 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 SDC1P18827 310 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 HIST1H1TP22492 207 aaPredicted RBP10.21□□□□□ -0.78
SS18-213ENST00000579640 ASMTP46597 345 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 ARSFP54793 590 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 DIO3P55073 304 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 MTTPP55157 894 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 RAB8AP61006 207 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 RAE1P78406 368 aaKnown RBP10.21□□□□□ -0.78
SS18-213ENST00000579640 ZNF763Q0D2J5 394 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 IL11RAQ14626 422 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 C16orf72Q14CZ0 275 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 MUM1Q2TAK8 710 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 CCNYL2Q5T2Q4 361 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 FAM91A1Q658Y4 838 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 CYP20A1Q6UW02 462 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 CACTIN-AS1Q8N1I8 211 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 LIX1Q8N485 282 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 ARHGEF39Q8N4T4 335 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 OR1L3Q8NH93 324 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 ZCCHC10Q8TBK6 192 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 SERINC2Q96SA4 455 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 CMKLR1Q99788 373 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 CLK4Q9HAZ1 481 aaKnown RBP10.21□□□□□ -0.78
SS18-213ENST00000579640 ANKHQ9HCJ1 492 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 RARRES3Q9UL19 164 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 G3BP2Q9UN86 482 aaKnown RBP10.21□□□□□ -0.78
SS18-213ENST00000579640 DLGAP4Q9Y2H0 992 aa10.21□□□□□ -0.78
SS18-213ENST00000579640 A0A0A6YYD5 115 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 GNG14A0A1W2PPG7 69 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 EFCAB7A8K855 629 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 B4E171 279 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 RTCAO00442 366 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 PRMT3O60678 531 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms