RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 ACPPP15309 386 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 ALAS2P22557 587 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 NEK2P51955 445 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 RAP1GDS1P52306 607 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 MTTPP55157 894 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 DDX39BQ13838 428 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 DSG2Q14126 1118 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 ABRAXAS2Q15018 415 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 AP5B1Q2VPB7 878 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 OR4C11Q6IEV9 310 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 METTL4Q8N3J2 472 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 ZCCHC7Q8N3Z6 543 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 ZNF781Q8N8C0 355 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 TWIST2Q8WVJ9 160 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 SERINC2Q96SA4 455 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 EFHD1Q9BUP0 239 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 C20orf27Q9GZN8 174 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 DDX31Q9H8H2 851 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 ZNF304Q9HCX3 659 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 TNFRSF12AQ9NP84 129 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 RIC8BQ9NVN3 520 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 FOXJ2Q9P0K8 574 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 NXT1Q9UKK6 140 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 WBP11Q9Y2W2 641 aaKnown RBP13.17□□□□□ -0.3
LINC01543-201ENST00000578367 TMED5Q9Y3A6 229 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
LINC01543-201ENST00000578367 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 C21orf140B9A014 251 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 HDAC3O15379 428 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 FOXS1O43638 330 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 B3GALT2O43825 422 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 LYPLA1O75608 230 aaPredicted RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 KLHL18O94889 574 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 NTRK1P04629 796 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 ZNF888P0CJ79 500 aaPredicted RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 LIPCP11150 499 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 ZNF28P17035 718 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 HIST1H1TP22492 207 aaPredicted RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 TBL3Q12788 808 aaKnown RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 IMPG1Q17R60 797 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 NKAIN1Q4KMZ8 207 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 XKR7Q5GH72 579 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 CLEC6AQ6EIG7 209 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 GALNT18Q6P9A2 607 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 MARCH9Q86YJ5 346 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 CHTF18Q8WVB6 975 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 FGF11Q92914 225 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 OR1F2PQ96R84 312 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 F2RL3Q96RI0 385 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 KCNA7Q96RP8 456 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 GPR87Q9BY21 358 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 ACPTQ9BZG2 426 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 SHCBP1LQ9BZQ2 653 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 TGIF2Q9GZN2 237 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 OR51B5Q9H339 312 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 LHX9Q9NQ69 397 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 PRDM7Q9NQW5 492 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 FARSBQ9NSD9 589 aaKnown RBP13.16□□□□□ -0.3
LINC01543-201ENST00000578367 STARD5Q9NSY2 213 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 C14orf105Q9NVL8 296 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 MS4A12Q9NXJ0 267 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 SLC12A4Q9UP95 1085 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 CCL27Q9Y4X3 112 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 DCHS1Q96JQ0 3298 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 HEATR5BQ9P2D3 2071 aa13.16□□□□□ -0.3
LINC01543-201ENST00000578367 IGLV3-12A0A075B6K2 115 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 TMEM8BA6NDV4 472 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 C9J4A7 227 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 PLPP1O14494 284 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 PCDH17O14917 1159 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 RAD1O60671 282 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 GUCY1B2O75343 617 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
LINC01543-201ENST00000578367 HTR6P50406 440 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.3
LINC01543-201ENST00000578367 TRA2BP62995 288 aaKnown RBP13.15□□□□□ -0.3
LINC01543-201ENST00000578367 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 MAD2L1Q13257 205 aaPredicted RBP13.15□□□□□ -0.3
LINC01543-201ENST00000578367 SGO1Q5FBB7 561 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 ADNP2Q6IQ32 1131 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 NUDT13Q86X67 352 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 SLC38A9Q8NBW4 561 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 GATA6Q92908 595 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 PMEPA1Q969W9 287 aa13.15□□□□□ -0.3
LINC01543-201ENST00000578367 NACC2Q96BF6 587 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms