RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CELSR2Q9HCU4 2923 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 TGFBR3LH3BV60 316 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 SH3BGRLO75368 114 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 CLDN1O95832 211 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 SLC35E2BP0CK96 405 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 MST1P26927 711 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 AGTR2P50052 363 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 HNMTP50135 292 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 HNRNPFP52597 415 aaKnown RBP11.17□□□□□ -0.62
LITAF-219ENST00000576334 KCNK10P57789 538 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 RAB10P61026 200 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 BTN3A2P78410 334 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 IRF9Q00978 393 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 ACTN3Q08043 901 aaPredicted RBP11.17□□□□□ -0.62
LITAF-219ENST00000576334 BMPR2Q13873 1038 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 RUNX2Q13950 521 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 SLMAPQ14BN4 828 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
LITAF-219ENST00000576334 PLAG1Q6DJT9 500 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 RIPOR1Q6ZS17 1223 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 KLHDC8AQ8IYD2 350 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 CA13Q8N1Q1 262 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 ST6GALNAC3Q8NDV1 305 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 SREK1Q8WXA9 508 aaKnown RBP11.17□□□□□ -0.62
LITAF-219ENST00000576334 CCT6BQ92526 530 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 CDKL2Q92772 493 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 UBXN10Q96LJ8 280 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 PTCHD1Q96NR3 888 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 SIGLEC12Q96PQ1 595 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 FAM129AQ9BZQ8 928 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 ALG9Q9H6U8 611 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 KCNK13Q9HB14 408 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 CD274Q9NZQ7 290 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 TXNDC16Q9P2K2 825 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 ZNF490Q9ULM2 529 aaPredicted RBP11.17□□□□□ -0.62
LITAF-219ENST00000576334 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
LITAF-219ENST00000576334 HMX2A2RU54 273 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 LRRC14BA6NHZ5 514 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 MAGEB17A8MXT2 336 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 UBXN8O00124 270 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 NDC80O14777 642 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 CCNT2O60583 730 aaKnown RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 URI1O94763 535 aaPredicted RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 LDLRP01130 860 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 SERPINA6P08185 405 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 GNAZP19086 355 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 PPP2R1BP30154 601 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 TDGF1P3P51864 188 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 OR4D2P58180 307 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 SLC26A5P58743 744 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 GUCY2DQ02846 1103 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 DOC2AQ14183 400 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 ELOAQ14241 798 aaKnown RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 ABHD17BQ5VST6 288 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 ZNF324BQ6AW86 544 aaPredicted RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 H3F3CQ6NXT2 135 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 TMIGD1Q6UXZ0 262 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 ABHD13Q7L211 337 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 ZNF572Q7Z3I7 529 aaPredicted RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 ISCA2Q86U28 154 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 RNF175Q8N4F7 328 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 TBC1D19Q8N5T2 526 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 SNX31Q8N9S9 440 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 TRPV3Q8NET8 790 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 NXNL1Q96CM4 212 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 MS4A6EQ96DS6 147 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 TSPAN17Q96FV3 270 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 SLX1AQ9BQ83 275 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 RAB17Q9H0T7 212 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 KLHL1Q9NR64 748 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 AGPAT4Q9NRZ5 378 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 IGSF5Q9NSI5 407 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 OLAHQ9NV23 265 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 DNAJC11Q9NVH1 559 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 C19orf25Q9UFG5 118 aaPredicted RBP11.16□□□□□ -0.62
LITAF-219ENST00000576334 RNF112Q9ULX5 631 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 POLEQ07864 2286 aa11.16□□□□□ -0.62
LITAF-219ENST00000576334 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 LRIT2A6NDA9 550 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 OR5H15A6NDH6 313 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 PCDH17O14917 1159 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CLGNO14967 610 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 ZNHIT1O43257 154 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 LRRTM2O43300 516 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 ERI3O43414 337 aaKnown RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 PRMT3O60678 531 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 H2AFYO75367 372 aaKnown RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 ICAM2P13598 275 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 TFEBP19484 476 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 SPRP35270 261 aaPredicted RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 GGT5P36269 586 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CD96P40200 585 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 PLA2G16P53816 162 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms