RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 KCNMB2Q9Y691 235 aa16.35■□□□□ 0.21
CLDN7-207ENST00000574070 IGLV3-12A0A075B6K2 115 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 A0A088AWK7 358 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 LRIT2A6NDA9 550 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 OR7A17O14581 309 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 DLX3O60479 287 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 UGDHO60701 494 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 SH3BGRLO75368 114 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 CLDN9O95484 217 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 RPS17P08708 135 aaKnown RBP16.34■□□□□ 0.21
CLDN7-207ENST00000574070 MYL2P10916 166 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 ZNF10P21506 573 aaPredicted RBP16.34■□□□□ 0.21
CLDN7-207ENST00000574070 MMP11P24347 488 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 CRHR1P34998 444 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 XCR1P46094 333 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 PLA2G16P53816 162 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 RRADP55042 308 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 CDH13P55290 713 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 BTN3A2P78410 334 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 HYAL2Q12891 473 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 CPZQ66K79 652 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 TTC19Q6DKK2 380 aaPredicted RBP16.34■□□□□ 0.21
CLDN7-207ENST00000574070 FAAH2Q6GMR7 532 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 TRIM40Q6P9F5 258 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 RPS27LQ71UM5 84 aaKnown RBP16.34■□□□□ 0.21
CLDN7-207ENST00000574070 VN1R5Q7Z5H4 357 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 MILR1Q7Z6M3 343 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 MRGPREQ86SM8 312 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 ZC3H7AQ8IWR0 971 aaKnown RBP16.34■□□□□ 0.21
CLDN7-207ENST00000574070 SRRM1Q8IYB3 904 aaKnown RBP16.34■□□□□ 0.21
CLDN7-207ENST00000574070 LAS2Q8IYD9 372 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 AFAP1L2Q8N4X5 818 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 OR52B6Q8NGF0 335 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 OR5T3Q8NGG3 340 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 RBCK1Q9BYM8 510 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 CENPHQ9H3R5 247 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 P4HTMQ9NXG6 502 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 LGALS13Q9UHV8 139 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 RNF11Q9Y3C5 154 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 SCN3AQ9NY46 2000 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 CCDC88CQ9P219 2028 aa16.34■□□□□ 0.21
CLDN7-207ENST00000574070 IDSB3KWA1 339 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 SLC28A2O43868 658 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 WISP1O95388 367 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TGFB1P01137 390 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TSPAN8P19075 237 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 SERPINB1P30740 379 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 HNRNPH1P31943 449 aaKnown RBP16.33■□□□□ 0.2
CLDN7-207ENST00000574070 CCL11P51671 97 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 HERVK_113P63132 956 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 PCDH1Q08174 1060 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 E2F2Q14209 437 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 SH2D5Q6ZV89 423 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 PPP1R32Q7Z5V6 425 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TRABD2AQ86V40 505 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 LAPTM4BQ86VI4 370 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TMEM102Q8N9M5 508 aaPredicted RBP16.33■□□□□ 0.2
CLDN7-207ENST00000574070 OR2L5Q8NG80 312 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TRPC4APQ8TEL6 797 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 ZNF483Q8TF39 744 aaPredicted RBP16.33■□□□□ 0.2
CLDN7-207ENST00000574070 ZNF473Q8WTR7 871 aaKnown RBP16.33■□□□□ 0.2
CLDN7-207ENST00000574070 MS4A6EQ96DS6 147 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 CCDC126Q96EE4 140 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 FER1L6-AS2Q96M78 137 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TMEM237Q96Q45 408 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 F2RL3Q96RI0 385 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 SMC6Q96SB8 1091 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 ERVK-6Q9BXR3 956 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 TGIF2Q9GZN2 237 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 ING2Q9H160 280 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 ZBTB26Q9HCK0 441 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 ADGRE2Q9UHX3 823 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 MID2Q9UJV3 735 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 EMCNQ9ULC0 261 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 MKL2Q9ULH7 1088 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 PCDHGA11Q9Y5H2 935 aa16.33■□□□□ 0.2
CLDN7-207ENST00000574070 PSMD12O00232 456 aaPredicted RBP16.32■□□□□ 0.2
CLDN7-207ENST00000574070 RGS16O15492 202 aaPredicted RBP16.32■□□□□ 0.2
CLDN7-207ENST00000574070 CHST10O43529 356 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 B3GALT2O43825 422 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 PLIN3O60664 434 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 SPAG7O75391 227 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 JRKO75564 520 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 CDC123O75794 336 aaPredicted RBP16.32■□□□□ 0.2
CLDN7-207ENST00000574070 DNAJB5O75953 348 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 BMP10O95393 424 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 OTCP00480 354 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 PROCP04070 461 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 SMIM10L1P0DMW3 83 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 IMPDH1P20839 514 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 PRKAA2P54646 552 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 CLCQ05315 142 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 SLC18A2Q05940 514 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 ZNF844Q08AG5 666 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 KCNAB2Q13303 367 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 ZRSR2Q15696 482 aaKnown RBP16.32■□□□□ 0.2
CLDN7-207ENST00000574070 UNC50Q53HI1 259 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 ZNF678Q5SXM1 525 aa16.32■□□□□ 0.2
CLDN7-207ENST00000574070 CEP85LQ5SZL2 805 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms